Silurus meridionalis (southern catfish): 124376537
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Entry
124376537 CDS
T08004
Symbol
kctd1
Name
(RefSeq) uncharacterized protein kctd1 isoform X1
KO
K21754
BTB/POZ domain-containing protein KCTD1/15
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124376537 (kctd1)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
124376537 (kctd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KCTD1-15_CTD
BTB_2
DUF3504
Motif
Other DBs
NCBI-GeneID:
124376537
NCBI-ProteinID:
XP_046691631
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All DBs
Position
23:12110358..12133949
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AA seq
756 aa
AA seq
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MARMPGSGHYCCGDDTTPVSGERERDLEDGEDGEDGEIQEIQITVDEGEECENKESELER
KNCEGSEEAVLMRNIDQQQGVHDVRMPDADEEDATHLSASERSRLSENTRLATRYAVRIF
REYLNETAQSTNFESMDKHGLCRVLRAFYSEARSKSGQLYSKSSLISIRSSLNRYLNEPP
FCRTLDLTKDPELRSANLALAAVIRRLEEQGAGPVVQKQAITRADLRRLYTSAAFSARTA
FGLLNKVWFETCMYFCTRGRENQRELEQGSFGLAADEDGRRFVYFKALGPYHKSRSSSWS
RKRSDLDEENLPRMYETGTEFCPYASFVKYLSKRNPACRAFFQRPRDHCGENDATWYENK
AVGKNLLGTRMQMLSRAAKLSKTYTNHCIGAVSVATLHSVAGIGSKLAPLPSAPETLNGS
LEARKMCKRPRAVIDPASVPTTGSSPKRLCARPGAENASPPVAVADSASPVAPTALEHQG
EPALVLSAQEHCSSVAMSTRPCLAQSPVSPVSTAGIPTPAQLTKGNAPVHIDVGGQMYTS
SLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGHMFRYILNFLRTSKLLVPDDFK
DYCLLYEEAQYFQLQPLQVELERWCSERDSGCVSRSCECVVMRVAPDLGERITLSGDKAL
IEDIFPEIGDVMCNSVNAGWNYDSTHIIRFPLNGYCHLNSVQVLERLQQKGFEIAASCGG
GVDSSQFSEYVLRREIKQVRSDVLTSVIQIKQEPLD
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaatgcctggcagcgggcactactgctgtggcgacgacacgaccccggtgtcc
ggagaaagggaacgggacttggaggacggagaggacggagaggacggagagattcaggag
atccagatcacagtggacgagggtgaagagtgcgagaataaagaaagcgagttggagcgc
aagaactgcgaaggaagcgaggaagcggtccttatgcgaaatatagaccagcagcaaggg
gtgcacgacgtgcgcatgccagatgctgatgaggaagatgcgacacatctgtctgcttcg
gagcgctcgcgtctgagcgagaacacgcgcttggccacgcgttatgcggttcggatcttc
cgcgagtatttaaacgagacggcgcagagcacgaacttcgaaagcatggacaagcacggg
ctctgcagagtgctgcgcgctttttactcagaggcgcgctccaagagcggccagctctac
agcaagtcgtcgctgatcagcatacgcagctcgctcaaccggtacctcaacgagccgcct
ttctgccgcacgctcgacctgaccaaggacccggagctgcgcagtgccaacctggcgctc
gcggcagtcatacgtcgtctggaggagcagggcgccggacccgtggttcagaagcaggcg
atcacgcgcgccgacctgcgcaggctctacacgtccgctgcgttcagcgcgcgcaccgcc
ttcgggctcctcaataaagtctggttcgagacgtgcatgtacttctgcacgagggggcga
gaaaaccagcgcgagctcgagcagggctcgttcgggctcgcagcggacgaggacgggaga
aggttcgtctacttcaaagcgctcgggccgtaccacaagtcccgctcttcatcctggagc
aggaaaaggtcagacctggatgaggaaaacctcccgcgcatgtatgaaaccggcacggag
ttttgcccttacgcgagcttcgtgaagtacctgtcaaagcgcaatcccgcgtgcagggct
tttttccagcgtccgcgcgaccactgcggtgagaacgacgcgacgtggtacgagaataaa
gccgtgggcaagaacctgctgggcacgcgcatgcagatgctctcgcgcgcggctaagctc
tccaagacctacaccaaccactgcattggcgccgtctccgtagcaacgcttcacagcgtc
gccggcatcggctcgaagttggcgccgctgcccagcgcaccggaaactctcaacggaagc
ctcgaggcgcgcaaaatgtgcaagcgtcctcgggcggtgattgatcccgcgagcgtgccc
acgacgggttcttcaccgaaaaggctttgcgctcgtcctggtgcggagaacgcgagccct
ccggtcgcggtcgcggattccgcgtcccccgtcgccccgactgcgctcgagcaccaaggg
gaacccgcgctcgtgctgtccgcgcaggagcattgcagtagcgtggccatgtcaacacga
ccttgtttggcacagtctccagtctctccagtgagtacagctggcatcccaacaccagcc
cagctgaccaaggggaacgctccggtacacatcgatgtgggaggacagatgtacaccagc
agtctcgctacgctcactaaataccccgaatctcggattggtcgattgtttgatggtaca
gagcccatcgtgctagacagcctaaagcagcattatttcatcgatcgagacggtcatatg
tttcgctacatccttaactttctcaggacttccaaattgctggtcccagatgactttaag
gattactgtctgctgtatgaggaggcacagtattttcagctgcagccactgcaagttgag
cttgagcgctggtgttcagaacgagactcagggtgtgtgtcacgctcatgcgaatgtgtg
gtgatgcgtgtggctcctgacctgggcgaaagaatcactttgagtggagataaggctctc
atcgaagacattttccctgaaattggagatgtcatgtgcaattcagtcaacgcaggatgg
aactatgattccactcatatcatccggttccctcttaacggatactgccatctaaattct
gtacaagttctggagcggctccagcagaagggatttgaaattgctgcatcgtgtggaggt
ggtgtggactcatcccagtttagcgaatatgttctacgaagagagatcaagcaagttcga
agtgacgtccttacatcagtcattcaaattaaacaggaaccattggactag
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