Silurus meridionalis (southern catfish): 124376576
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Entry
124376576 CDS
T08004
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124376576 (si:dkey-183n20.15)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124376576 (si:dkey-183n20.15)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124376576 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-C3HC4
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
124376576
NCBI-ProteinID:
XP_046691696
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All DBs
Position
23:9667365..9673013
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AA seq
204 aa
AA seq
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MSTTEDYQSGISAGRMDLYCPVCLHVAVFPVETNCGHGFCAPCLISYWKHSCCLEAISCP
LCRQKVSVMYHQFQESRSDRKEREVLGHVRDYNKRYSGAPRRISDYLFDAPFFLLLLFRA
LWNMGGLVWLFLVRVALCGFGAAASLVSPLEAVPGHFSGALGLLDDLVVVFLLLIAIINI
HQQMVPERTTRPHTVEHGILSDML
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgagcactactgaggactatcagtcaggcatatctgcaggtagaatggacctctattgt
cctgtatgtttacacgtagccgtttttcctgtggagacaaactgtgggcatggattctgt
gctccttgtctgatatcgtactggaaacatagctgctgtttagaagcgatcagctgtcct
ttgtgcagacaaaaggtgagtgtcatgtatcaccagttccaggagagcagatcagacaga
aaggagcgagaggtactgggccatgttagagactataataaacgctattcaggagcacca
cgaaggataagtgactacctctttgatgctcctttcttcctgctgcttttgttccgggct
ttgtggaacatgggcggtttggtgtggctcttcctggtaagagtggcactgtgtggattc
ggggcagctgcatcattggtgtctccattagaggctgtgcctggacacttcagtggggca
ttgggacttttagatgaccttgtggtagtgtttctcctcctcatcgccatcattaacatc
caccagcagatggtgccagaaaggacaaccagaccacacactgtggaacatgggatactg
tctgacatgctgtaa
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