Silurus meridionalis (southern catfish): 124376591
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Entry
124376591 CDS
T08004
Symbol
ppp2r5cb
Name
(RefSeq) protein phosphatase 2, regulatory subunit B', gamma b isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03015
mRNA surveillance pathway
smeo04110
Cell cycle
smeo04114
Oocyte meiosis
smeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124376591 (ppp2r5cb)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124376591 (ppp2r5cb)
04114 Oocyte meiosis
124376591 (ppp2r5cb)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124376591 (ppp2r5cb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124376591 (ppp2r5cb)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124376591 (ppp2r5cb)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124376591 (ppp2r5cb)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124376591 (ppp2r5cb)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124376591 (ppp2r5cb)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124376591 (ppp2r5cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
124376591
NCBI-ProteinID:
XP_046691713
LinkDB
All DBs
Position
23:complement(16944341..16969961)
Genome browser
AA seq
580 aa
AA seq
DB search
MSAMPNKTKKDKESPKSGKVSKTTGQENSDHEGSNRKGSNSVPPTTQLLKGKQSGSQAPV
KKEKRQSSSRFSLSNNRELQKLPAFKDVPPAEQENLFLQKLRQCCVLFDFVSDPLSDLKW
KEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEP
TLEAAWPHLQLVYEFFLRFLESSDFQPNIAKKYIDQRFVMQLLELFDSEDPRERDFLKTT
LHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKI
FLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFL
NELEEILDVIEPSEFVKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAR
ILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFRAEKNKEKLKWKE
REEAWIKIENLAKSNPQFLLYIDSTGLSSPMEIETDSVGMDDVTALKKAVEEEAVQLQRE
QRRERPLMRRKSELPHDMSTVKALETHRRADDMITSRDGH
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgatgccgaacaaaacaaaaaaagacaaggagtcaccgaagtctggaaaagtc
agtaaaacgacaggacaagaaaattcagatcatgagggatctaacaggaagggcagtaat
agcgtgccgcccaccacacagctgctgaaggggaaacagtctggatctcaagcccctgtc
aaaaaggagaagaggcaaagctcatctcgctttagcctcagtaataaccgcgagctccag
aaacttcccgcctttaaagatgtgcccccagcagagcaggagaatctgtttttgcagaag
ctgcgccagtgctgtgtgctctttgactttgtatccgacccgctgagcgatctgaaatgg
aaggaggtgaagcgggcggcactcagtgagatggtggaatacatcacacacaacaggaat
gtcatcactgaacccatctacccagaggtggtgcacatgtttgcagtcaacatgttcagg
acattaccgccctcgtccaacccgacaggggcagaatttgacccagaggaggatgagccc
acgttagaggctgcctggccgcatttgcagctcgtctatgaattcttcctgcgtttttta
gagtcttcagacttccaaccaaacatagccaaaaagtacattgaccagagatttgtcatg
cagctcttagaactctttgacagtgaagaccctcgagaaagagacttcctgaaaaccact
ctgcatcgcatttatggcaaatttctaggcctcagggcctacatcaggaagcagattaat
aacatattctataggttcatttacgaaacagagcatcataatggaatagcagagttactt
gaaatattaggaagcataatcaacgggtttgccttaccactgaaagaagagcacaaaata
ttcttgttgaaggttttgttgcctttgcataaagtcaagtctctcagtgtttaccacccg
cagctggcttactgtgtggtacagttcttagagaaggacagcactctcacagagccggtg
gtcatggctcttctaaagtactggccgaagacccatagcccaaaggaggtgatgttcctc
aacgagcttgaggagatcctggatgtaattgagccctctgagtttgtcaaagtcatggag
cctctcttcagacagttggcaaaatgtgtctccagtccacactttcaggttgcagagaga
gccctgtattactggaacaacgagtacatcatgagtctgatcagtgacaatgcagccaga
attttgcccatcatgtttccgtccctttaccgcaactcgaaaacccactggaacaaaaca
atccatggtttgatctacaacgctttaaagctcttcatggagatgaatcagaaactcttt
gatgactgtacacaacagttcagagcagagaaaaataaagagaagctaaagtggaaagag
cgtgaggaagcctggataaaaatagaaaaccttgcgaagtcgaacccccagttcctcttg
tatattgactcgaccggtttgagtagcccaatggaaattgaaacggacagcgtaggaatg
gatgatgtcaccgcgctcaaaaaggcagtagaagaagaagctgtgcagcttcagagggag
cagcgaagagagcgacccctaatgcgtcgcaaatcggagcttcctcacgacatgtccaca
gtaaaggccctagaaacccaccggcgtgcggatgacatgataaccagccgtgatggccac
taa
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