Silurus meridionalis (southern catfish): 124376697
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Entry
124376697 CDS
T08004
Symbol
dsg2.1
Name
(RefSeq) desmoglein-2.1
KO
K07597
desmoglein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04382
Cornified envelope formation
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124376697 (dsg2.1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124376697 (dsg2.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124376697 (dsg2.1)
Cell adhesion molecules [BR:
smeo04515
]
Cadherins
Major cadherins
124376697 (dsg2.1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
RibLong
Motif
Other DBs
NCBI-GeneID:
124376697
NCBI-ProteinID:
XP_046691867
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Position
23:complement(11645714..11657006)
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AA seq
1125 aa
AA seq
DB search
MDRLQRSQSLFRLVFVVIWCVFEAKAKADHAVSLQRHRREWIVPPQVLEENVDYTKQSSI
ARIRSDREDASKGPIRYSLKGIGADQPPYHLFVVEPSTGNVRVTGILDREEIGQYNLSGI
ATYPDGTVAEADIQLRIKVKDQNDNAPVFLPISTGSVNELSSIGTTVMKLSATDADEPGN
INSQIFYEIVDQKPPGERMFSINQKGEVIVARENLDRESIDQYVLTVKASDLNGGPGCKT
GMATFNIQVMDVNDNVPKLEQEAFEASIEENTENVEVMRFKTIDNDLANTDNWQAQYNIV
SGNGGGHFKIVTDPKTNEGVLMLVKPVDYEEVKDMNLGITVSNVAPYYSGSGSQSVSGVV
IAPGGGGGGGGGGGQGGGAGSGGGTGIGGGAGTGITGMGGSGTAGASGKIYNMHVNVKNQ
PEGPGFIPKVKSIPISENGKMVDITKVLTTYTATDSDTGLPAERVKYVKGSDRDNWLSVD
EKTGEIKLNKLPDRESPYLVNGTYMAEILCISQDMPSKTATGTVAIQVEDFNDHCPVLVN
KTQPLCTTQEVLYVTAEDKDAFPNAGPFTFTVIPEGTDGKWELEHLSDTTAMLKPIEAPW
PGPRQVTLEIFDQQKVSCPDKQVLKVNVCTCDKSGVCATKAGETKGSKLGGAAIGLLLLG
LLLLLLIPLLLLLCQCGAAGMVGAFTDMPFDTKEHLISYHTEGQGEDRDVPLLLSDIDGP
GMINAGSKGGFGASMAGFGIGAAGAAGAAGVGSYKVSTMNGEVTCIIRWKSQALYATTED
DLLQFGLEGQGSPAGSVGCCSILGSDDDTEYLNDLGPKFTTLAEICRGKKFTMEAPTPTP
FFPPSPPKPIVEHTESVSMQTNMANTVNMANTVNMANTVNMAAKVEAPSTMHREENVVVT
NTQVVSDMQPVQTLPTQTLMVQQQPMYYMVEPQVSNTVLLAERPTMGLTQGMYVLNGAPM
NERFLVQGAVPSQATIGGGERVMFLGTHGGSTTALNTGLLQSANMSGSQLLLVDTGAQGG
QVLQGTLQRGGIAGSQGIYMVEGQGGSAIHGTLQRGVAGGSESMVHILEQQGGTSGITHG
TLQGGITSSVFSQNGTIGVNTSTAHGLPSSRQVLVQEKKVVKTNL
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggaccggttacagcgttcacagtcacttttccgccttgtttttgtcgttatctggtgt
gtgtttgaagctaaagccaaagcagaccatgctgtatctcttcaaagacacaggagagaa
tggattgttcctccacaagttttagaggagaatgtcgactacactaaacagagctctatt
gctaggatacggtcagacagggaagatgcgagtaaaggccccataagatattccttgaag
ggcatcggtgcagaccagccaccctatcacttgtttgtggtggagccttccactggcaat
gttcgagtaactggaatcctggaccgagaggaaattggccaatacaatctctctggaatt
gctacataccctgatggcacagtggcagaggctgatatccagctgagaataaaagtcaaa
gatcagaatgacaatgcacccgttttcctgcccatcagcacaggatctgtgaacgagctt
agctctataggtacaaccgtcatgaaactatcagcaaccgatgccgacgaaccagggaat
atcaactctcagatcttctatgagattgttgatcagaagcctcccggagaaaggatgttt
agtatcaatcagaaaggagaagtgattgttgccagggaaaacttagaccgagagtcaatt
gaccagtatgtacttactgtaaaagcctcagacctcaacgggggtccaggttgcaagacc
ggaatggcaacgttcaatatccaggtcatggatgtcaatgataacgtcccaaaactggaa
caagaagcttttgaagcaagtattgaggagaacactgagaacgtggaggtgatgagattt
aaaaccattgataacgacttggcaaacactgacaactggcaggctcaatacaacatcgtg
tcagggaatgggggtggccatttcaagatcgtcactgatccaaagaccaatgagggagtc
ctgatgcttgtcaagcctgtagactatgaggaagtgaaagacatgaatctgggcatcact
gtgagcaatgtggccccatactattcaggatctgggtctcaatctgtttccggagtggtg
atcgcaccaggaggaggaggaggaggaggtggaggtggaggacagggcggaggggcagga
tcaggcggaggaacaggtataggaggaggggcaggcacaggaataacaggaatgggaggc
agtgggacagcaggagcgtctggtaaaatctacaatatgcatgttaatgtaaagaatcaa
ccggaaggcccaggcttcattcccaaagtaaagtccattccgatttctgaaaatggcaag
atggttgatataacaaaggtcctcacaacgtacactgctactgattcagatacaggattg
cctgctgaaagagtaaaatatgtgaaaggctctgatcgagacaactggctatccgtcgac
gagaaaaccggtgaaattaaattgaacaaactcccagatcgagagtctccatacctggtc
aatgggacttacatggcagaaatcctctgcattagccaagacatgccctctaagactgcc
acgggcacagtcgccatccaagtggaggactttaatgaccactgtcctgttctagtcaac
aaaacacagcctttgtgcaccactcaggaagttttgtacgtcactgcagaggacaaagat
gcttttccaaatgcaggtccttttacattcaccgttatccctgaaggcactgatggaaaa
tgggaattggagcatttgagtgacacaacagccatgttgaagcccatcgaagcaccgtgg
ccaggccctcgtcaggtgactttggaaattttcgaccagcagaaggtgtcgtgtccagac
aagcaagtgctaaaagtgaatgtttgcacatgcgataaatcaggagtgtgcgccacgaag
gcgggtgaaaccaagggctcaaaacttggtggtgctgcaattggcttgcttttactggga
ctcctcctgttattacttattccacttctactgctgttgtgtcaatgtggagcagccggc
atggttggagccttcactgacatgccttttgacactaaagagcatctgatttcttaccat
actgaagggcagggagaagaccgggatgtgcccttacttctgagtgacattgatggtcct
ggaatgatcaacgcgggctcaaaaggtggctttggggccagcatggcaggttttggtatt
ggagctgcaggagcagcaggagcggcaggagttggcagttacaaggtgtccaccatgaac
ggggaggttacatgtataatcagatggaaaagccaggccttatatgccacaactgaagac
gatttgctgcaatttgggcttgagggtcagggctcaccagcaggttctgtaggctgctgc
agcatcctgggatcagatgatgatacagagtacctgaatgacttgggaccaaagttcact
accctagctgagatatgtagaggcaaaaagttcacaatggaagctcccacccctactcct
ttttttcctccttctcctccaaaacccattgtagagcacacggaatcagtttccatgcaa
accaacatggctaacactgtcaacatggctaacactgtcaacatggctaacactgtcaac
atggctgccaaagttgaagcaccctctaccatgcacagggaggagaatgtggtagttaca
aacacccaagtagtgtcagatatgcagccggtccagactctgcctacccagaccctgatg
gtgcagcagcagccaatgtactacatggtggagccgcaggtctctaacactgtgttattg
gccgagaggcccactatgggactgacccaagggatgtatgtgttgaatggagctccaatg
aacgaaagattcctggtccagggtgctgtcccatcacaagccacaattggtggaggcgaa
agagtgatgtttttgggaacacacggaggatccaccacggcactaaacacaggcctgctc
cagtcagccaacatgtctggatcccagctgctattggttgatacgggtgcacaaggtggc
caggtcctccaaggaacactgcagagagggggtatcgctggatctcaaggtatatatatg
gtcgaaggccaaggagggtccgcaattcacggaaccctccaaagaggcgtagctggagga
tctgagagtatggtgcatatcctggaacaacaagggggaacgtcaggaatcacacatgga
accctgcaaggggggataacatccagtgttttctcccaaaatgggactattggagtgaac
acaagcactgcacatggacttcccagctcacgtcaagttctggtccaagagaagaaggtt
gtgaaaaccaacctgtaa
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