Silurus meridionalis (southern catfish): 124376731
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Entry
124376731 CDS
T08004
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00562
Inositol phosphate metabolism
smeo01100
Metabolic pathways
smeo04020
Calcium signaling pathway
smeo04070
Phosphatidylinositol signaling system
smeo04081
Hormone signaling
smeo04082
Neuroactive ligand signaling
smeo04261
Adrenergic signaling in cardiomyocytes
smeo04270
Vascular smooth muscle contraction
smeo04310
Wnt signaling pathway
smeo04371
Apelin signaling pathway
smeo04540
Gap junction
smeo04621
NOD-like receptor signaling pathway
smeo04912
GnRH signaling pathway
smeo04916
Melanogenesis
Module
smeo_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
124376731
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124376731
04371 Apelin signaling pathway
124376731
04020 Calcium signaling pathway
124376731
04070 Phosphatidylinositol signaling system
124376731
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124376731
04081 Hormone signaling
124376731
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
124376731
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124376731
09152 Endocrine system
04912 GnRH signaling pathway
124376731
04916 Melanogenesis
124376731
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124376731
04270 Vascular smooth muscle contraction
124376731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124376731
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
124376731
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
124376731
Endocytosis
Macropinocytosis
Phospholipase C
124376731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PH_14
PLC-beta_C
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
DUF6158
Motif
Other DBs
NCBI-GeneID:
124376731
NCBI-ProteinID:
XP_046691911
LinkDB
All DBs
Position
23:complement(14804975..14898969)
Genome browser
AA seq
1241 aa
AA seq
DB search
MAGPQPGVHALQLKPVAVPECLRKGNKFMKWEDDSTTVTPVTLRVDPKGYFLYWTDQNKE
TDLLDITYIKDARTGKFSRIPKDAKVREQLGVSGVAGKFENRILTVVTGPDMVNITYLNF
MAFQDEVAKEWSDKLFSLSSNLLIQNSSRESCLEKVYTRLVLQVTPEGSIPVKNIFRVFS
ADRKRVENALEICGLPSGRNDLMSQEQFTSDIFRVFLNNICPRKDIDTIFSEIGAKSRPY
LTVDQMTDFINNKQRDPRLNEILYPPLKPEQVQALVEKYEPDTMLYQRGQISVEGFARYL
NGEENSIIPLEKLDQSEDMTLPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRC
VELDCWKGRTAEEEPIITHGFTMTTEISFKEVIEAIAETAFKTSPFPVILSFENHVDSPK
QQGKMAEYCRSIFGDALLTEPLEKYALEPGNPLPSPMDLLGKILIKNKKNSHKDEGSAKK
KLCEQTSNTYSDSSSVCEPSSPSAGSTNHDMPDSSQPNSETGSDSRLQGRKYIGEVDAES
DDEDDEDDDCKKSIDEGTAGSEAFATEEMSNLVNYVQPVKFSSFEASKKSNKSYHMSSFV
ETKALEQLTKSPVEFVEYNKLQLSRIYPKGTRVDSSNYMPQVFWNAGCQLVALNFQTIDL
AMQLNLGMYEYNGKCGYRLKPEFMRRPDKNFDPFTESTVDGIVAHTLSVKIISGQFLSDK
KVGTYVEVEMFGLPVDTKRKAFRTKTSPGNAVNPVWDEEPIVFKKVVLPTLASLRIAVYE
DNGKIIGHRIIPVNAIRPGYHYIGLRNEKNQTLTLPAVFVYTEVKDYVPDTFADVIEALS
NPIRYINLMEQRANQLAALTEEEGGQDVNNKVIDACGELVSESNCEAQPPPAENGTSHTP
LISPKPPSLVSHHAHSTGSVKPAVKNEDVIQSVLTELEGQTLEELKQQKAFVREQKKQYK
ELKELVKKHHKKTTDLIKDHTARQNELQSEYQRRHKSAKRDGKKSRSGSEQALSAVDQEL
VSLEEENTQRLSELKEQQQHQLLTLRQDQYYSEQYLKGKHIKQLVEKLTTVAEECQSNQL
KKIKELCEKEKKDLKKRMDKKRQERIHEAKAKQKNLTEEEKLEINRSHVNEVVQYIKRLE
DAQSKRHEKLIEAHKLIRQQILEEKPKLQNELDKEYQDKFRRLPLEIQEFVQESAKGKLS
NEWDSSCLSTSSTAENLNRKAGQSEEETEEDFAEKVFDTSL
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtccacagccgggggttcacgcgctccagctcaaacctgtggccgtaccggag
tgtttgaggaaaggaaacaaattcatgaaatgggaggatgactctaccactgtgactcct
gtgacactacgggtagaccccaaaggctacttcttgtactggactgatcagaataaggag
acagatcttctggacattacttatatcaaggatgctagaactggtaaattttccaggata
cccaaggatgctaaagtgcgggagcagctaggggtgtccggggtggcgggaaagtttgag
aacagaattctcacagtggtaactggtccagatatggtcaacatcacctacctgaacttc
atggcatttcaggatgaggtggctaaggagtggtcagacaaactcttcagcttgtcctct
aatctcctgatacaaaactcatcccgggagtcctgtctagaaaaagtgtatactagacta
gtgctgcaggtcactcctgaaggatctattcctgtgaagaacatcttccgtgtgttttcg
gcagacaggaagcgagttgagaatgcactggagatctgtggtcttccgtctgggagaaat
gatttaatgtcccaggaacagttcacttcagatattttcagagttttcctcaataacatt
tgtccccggaaggacatcgataccatcttctctgaaattggtgctaagagtaggccatac
ctcacagtagatcagatgactgacttcatcaacaacaagcagcgggaccctcggttgaac
gagatcctgtaccctcccctgaagcccgagcaagtgcaggctctggtggagaagtatgaa
ccggacaccatgctctatcaaagagggcagatctctgtggagggttttgccaggtatcta
aatggagaagagaacagcatcatccctcttgaaaaattggaccaaagtgaggacatgaca
cttcctttgtctcactatttcatcaactcctcacacaacacttacctcacagcggggcag
ttggcaggaaactcctcagtggagatgtacaggcaggtgctgctgtcaggctgccgctgt
gtggagctggactgctggaaaggacgcacggccgaggaggaacccattatcacccacggc
ttcaccatgaccaccgagatctcctttaaggaagtgattgaggccattgctgagactgct
ttcaagacatctccttttcctgtcattctttcatttgagaaccatgtagactcccccaag
cagcaaggtaagatggctgagtactgcagatcaatatttggagatgctctgcttacagag
ccactggagaaatatgcactggaaccaggaaatcctttgccgagtccaatggacctctta
gggaaaattctcatcaagaacaaaaagaactcccacaaagatgagggcagcgcaaagaag
aagctctgtgagcagacctctaatacctacagcgattcatctagtgtgtgtgagccgtca
tctccaagcgcaggctctacaaatcatgacatgccggactccagtcagccaaactctgag
acaggcagtgacagcagactacaggggagaaaatatattggtgaggttgatgcagaaagt
gatgatgaagatgacgaagatgatgactgtaaaaagtccattgatgaggggacagcggga
agtgaagcatttgccacagaggagatgtccaatttagtcaactatgtccagccagtcaag
ttcagctcatttgaagcttctaaaaagtcgaataaaagttatcacatgtcatcatttgtg
gagacaaaggcactagagcagctgacgaagtctccagtggaatttgtggagtataacaaa
ctacagcttagtcgaatctaccccaaaggcacaagagtggactcctccaactacatgcct
caggtgttctggaatgctggatgtcaacttgtggcactgaacttccagacaatagatctg
gccatgcagctgaacctgggcatgtatgagtacaatggaaaatgtggctacaggctaaaa
cccgagtttatgaggaggcctgataaaaactttgaccccttcactgagagcacagtggat
ggaattgtagctcacacactttcagtaaagatcatatcaggacagtttctgtctgataaa
aaagttggcacctatgtggaggtggaaatgtttggcctcccagtggacactaaaaggaaa
gcatttcggacaaagacatctcctggcaatgctgttaaccctgtgtgggatgaggagccc
atagtctttaagaaggtggttcttcccacacttgcgtctttgagaatagctgtctatgaa
gacaatgggaagattattgggcatcgcatcatcccggtgaacgccatcaggcctggttac
cattacatagggctacggaatgagaagaaccagacactaacactacctgctgtctttgtc
tacactgaagttaaagactatgtccctgacaccttcgcagatgttattgaggcgctgtcc
aatcctatccgctacatcaacctgatggagcagagagccaatcaactcgcagctctcact
gaggaggaaggagggcaagatgtgaacaacaaagtgatagatgcatgtggggagcttgta
tcagagtcaaactgcgaggcccagcctcctccagccgagaatggaacgagccatactcct
ctcatctcccctaaaccaccttcactggtcagccatcatgctcactccacaggatctgtt
aaaccagccgttaagaatgaagatgtgattcagagtgttttgacagagctggaaggtcag
acactggaggaactaaagcaacagaaggcttttgtgcgtgagcagaagaaacaatataaa
gagctgaaggagctggtgaagaaacaccataagaaaaccacagacctgatcaaagatcac
acagccagacaaaatgagctgcagagtgaatatcagcgccgccacaagagcgccaaacga
gacggtaagaaaagtagatctggttcagagcaagctctgtctgctgtggatcaggagctg
gtgtcactggaggaggagaacacgcagagactaagtgaactgaaggagcaacagcagcat
cagttgcttactctcagacaagaccagtactacagtgaacagtacctcaaaggcaaacac
attaaacagctggtggagaagctgaccactgtagctgaggaatgtcagagtaaccagctg
aaaaaaattaaggagttgtgtgagaaagaaaagaaagatctaaagaaaaggatggacaag
aagaggcaggagaggatacatgaggcaaaagcaaaacagaagaatttaacagaggaagag
aagttagaaatcaacagatcacatgtgaatgaggttgttcagtatattaaaaggctggaa
gacgctcaaagcaaaaggcacgagaagctgatcgaggcacacaaacttattcgacagcaa
atcctggaggagaagccgaagcttcaaaacgagctggacaaggaataccaggacaagttc
agacgactcccattggagatccaagagtttgtccaggaaagtgctaaaggtaaactaagt
aacgaatgggactcgagctgccttagcacgtcatccaccgccgagaacctcaaccgcaaa
gcaggccagtcggaggaggaaacagaagaggattttgcagagaaggtgtttgacacttct
ctctga
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