Silurus meridionalis (southern catfish): 124376738
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Entry
124376738 CDS
T08004
Symbol
yy1b
Name
(RefSeq) transcriptional repressor protein YY1b isoform X1
KO
K09201
transcription factor YY
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03082
ATP-dependent chromatin remodeling
smeo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124376738 (yy1b)
03083 Polycomb repressive complex
124376738 (yy1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124376738 (yy1b)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124376738 (yy1b)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124376738 (yy1b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124376738 (yy1b)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
124376738 (yy1b)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
124376738 (yy1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2H2_ASCIZ
TFIIIA_zf-C2H2
Raffinose_syn
MAM
zf-C2H2_ZN142
IBR
Motif
Other DBs
NCBI-GeneID:
124376738
NCBI-ProteinID:
XP_046691930
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All DBs
Position
23:complement(14532599..14546434)
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AA seq
385 aa
AA seq
DB search
MASGETLYIETDGSEMPAEIVELHEIEVETIPVETIETTVVGGDDDEDEEDDEDEDDEHQ
PMIALQPLVTDDPSQVHHQEVILVQTREEVVGGDESDLRTDDGFEDQILIPVPAPGSEEE
YIGQTLVTVAGKSSVGRMKKGGSSGKKASKKSYLSASEATGRKWEQKQVQIKTLEGEFSV
TMWASDDKKDIDHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFAS
YNSGSLGRAPVRMKPRKVKEDDAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAE
CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG
CNKKFAQSTNLKSHILTHAKAKNNQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcatccggcgaaacgctgtatattgagacggacggctcggagatgccggctgaaata
gtggaacttcacgagatcgaagtggagaccatcccggtggaaacgatagagacaaccgtg
gtcggaggcgacgacgacgaggatgaggaggacgatgaggatgaggatgacgagcaccag
cccatgatcgccctgcagccgctggtaacagatgacccgagtcaggtccaccatcaggag
gtgatcctggtgcagacccgggaggaggtggttggaggggacgagtccgatctgcggaca
gacgacgggtttgaggaccagatcctcatcccggtgcctgctccagggtctgaggaggag
tacatcggacagactctggtcacggtagccgggaagagttccgtgggccgtatgaagaaa
gggggaagcagtgggaagaaagcgagtaaaaagtcgtacctgagcgccagcgaggccacc
gggagaaaatgggagcaaaaacaggtgcagataaagacactggaaggggaattctccgtg
acgatgtgggcgtcggatgataaaaaggacattgaccatgaaacagtggtggaggagcag
attattggcgagaactcgcctccagattactctgaatacatgactggaaaaaagcttcct
cctggtggcatcccgggcatcgacctgtctgaccccaaacagcttgcagaatttgccagt
tacaatagcggctctttgggtcgcgccccagtacgaatgaaaccacgaaaggtcaaagag
gacgacgcacccagaacgatagcctgcccccacaaaggatgcacgaagatgttcagggat
aactctgcaatgagaaagcacctccacacccacgggccccgggtccatgtgtgtgcagag
tgcgggaaagccttcgtagagagttcaaaactaaagcgccaccaacttgttcacaccgga
gaaaaaccttttcagtgtacttttgagggctgcgggaaacgtttctccctggactttaac
ctccgcacacatgtgcgaattcacaccggagaccgcccatacgtctgtcctttcgacggc
tgcaataaaaaatttgctcagtctaccaatcttaagtctcacatcctgacacatgcaaaa
gccaaaaacaaccaatga
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