Silurus meridionalis (southern catfish): 124376771
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Entry
124376771 CDS
T08004
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124376771 (brf1b)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
124376771 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Zn_ribbon_tTFIIB
A2L_zn_ribbon
Motif
Other DBs
NCBI-GeneID:
124376771
NCBI-ProteinID:
XP_046691996
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All DBs
Position
23:13329248..13388044
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AA seq
701 aa
AA seq
DB search
MSSRRCKNCGGDDIDIDQARGSAVCTTCGSVLEDNIIVSEVQFVENSGGGASAIGQFVSA
DGPAKTPVLGTGFHTSLGKESRAQTLQNGKRQIHSLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKMAHVIAACLYLVCRTEGTPRILIRATIYMLLDLSDLLQVNVYILGKTFLLLAR
ELCINAPAVDPCLYIPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAA
LLVAARMHEFRRTVKEVIGVVKVCEATLRKRLTEFEDTPTSHLTIDEFMRVDLEEECDPP
SFVAGQKKLKIMQLEQELAKKLDEYQGEISSYRDEIETELENSRPKLRGIYAMYVQEDTS
DGSVSLGSDLAGDEDTEDEEIEAAAQHLHEDFMNQVLPELAQGPQGGTEAQEQGKETAEL
PSGSTHVPLTSLLGPLPSAASLGLTDSIRHCLTDEGEDEDKTDNGELNLEGIDEDEIEKY
ILNEKEVQAKTKLWMMQNEEYLREQKEKEERIAREKEQGIYKEKPKKSSKRREPIRASTA
GEAIEKMLEQKKISSKINYDVLRDLNSKGSSSPAHTTEEVSAIVPGRKKLTRRKKQPNKS
NLGLAKPASLMGKRLRPLIASNHKKKRAATQMQPNALMPPPVTPETPPAPTPPAVIESGP
VAYEEPTEEEDDEEVEEPCISAMKLMGGNEYGCEGEEEEVF
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcaggcgctgtaagaactgtggtggagatgatatagacatagaccaggcgcgt
ggaagtgctgtgtgcaccacctgcggctctgtgctcgaggacaacatcatcgtgtctgag
gtgcagtttgtggagaacagtggtggaggagcttctgctatcggacagttcgtgtctgct
gatggtcctgcgaaaaccccagttcttggaaccggcttccacacaagtcttgggaaggag
tcacgtgctcagacacttcagaatgggaaacggcaaatacacagcctgggcagccagctg
cagctaaaccagcactgcctagacacagccttcaacttcttcaagatggtggtgagcaag
catctgacaagaggacgcaagatggcccacgtcatagctgcctgcctgtatctggtgtgt
cggacagaggggactccccgtatccttattcgcgccacgatttatatgctcctggacctg
agcgatcttttacaggtgaatgtgtatatcctgggaaagacttttctgctgttggccaga
gagctctgcatcaatgcgcctgctgtcgatccatgcttgtatattccccgctttgcacac
atgttggagttcggagagaaaacacatgaagtgtctatgactgcactgagactgctccag
aggatgaaaagagactggatgcacacaggacgcagaccgtctggactctgtggtgcagct
ctgttggtggcggcccgcatgcatgaattccgccgcacggtgaaggaggtcattggcgtg
gtgaaagtatgcgaggcgactctcagaaagaggctaacagagtttgaggacacacccacc
agtcacctgaccattgatgagttcatgcgagtggacctggaggaggagtgtgatccccct
tcttttgttgctggtcaaaagaagttaaagatcatgcagttggaacaggagcttgccaag
aagcttgatgaatatcaaggtgagatcagttcctatcgggatgagatcgagactgaactg
gagaacagcaggcctaaactgagaggaatctatgccatgtatgtgcaagaagacaccagc
gatggcagtgtgtctctggggtcggacctggcaggagatgaggacacggaagatgaggag
atagaggcggcagctcagcacctccatgaggacttcatgaaccaggtgttacctgaactg
gcacagggacctcaggggggcacagaggcacaggagcagggtaaagaaacagcagagctg
cccagtggctccactcatgtgccactgacttcactgcttgggccacttcctagcgctgcc
agccttggcctcacagactctatccgccattgcctgacagacgagggggaggatgaggac
aagacagataatggcgagcttaatctggaaggcatcgatgaggacgagatcgaaaagtac
attctcaatgagaaggaggtgcaggctaagacgaagctgtggatgatgcaaaatgaagag
tatctaagggagcagaaagaaaaagaagagaggatagctagggagaaagagcaaggaatt
tataaggagaagccgaagaaatcgtccaaacgccgagagcctattcgggccagcactgca
ggagaagcaatagagaagatgttggaacaaaagaagatttcgagcaaaatcaattacgat
gtgctgcgagacctgaacagcaaaggcagcagcagcccggcacatacgacagaggaagtg
tctgctatagtccctggacgtaagaagctcacccgccgcaagaaacagcccaacaagagc
aatctgggtctggccaagcctgccagccttatggggaaaaggctccgccccctcattgcg
tcaaatcacaagaagaaaagagcagctacacagatgcagcccaatgctctgatgccccct
ccagtaacccctgaaactcctcctgcacctactcctcctgcagtcatagagagtggccct
gtggcatatgaggaacccactgaggaagaggacgacgaagaggtggaggagccctgcatc
agtgctatgaagcttatgggagggaatgaatatggttgcgaaggcgaagaggaggaagtt
ttttag
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