Silurus meridionalis (southern catfish): 124376802
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Entry
124376802 CDS
T08004
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124376802 (rrp12)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
90S particles
Other 90S particles
124376802 (rrp12)
Pre-60S particles
Other pre-60S particles
124376802 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
Motif
Other DBs
NCBI-GeneID:
124376802
NCBI-ProteinID:
XP_046692042
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All DBs
Position
2:complement(17652093..17666981)
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AA seq
1285 aa
AA seq
DB search
MVKSGKLRSGTAQKLKRWKKGHSSDSNPQTSRYRQAARSRFFSRPIEKSDLTVDALKLHN
ELQTGSLGRKKDGLEDAMEETTALTERTSGTFLSGLSDCSNLTFRKVQRYWESNSAAHKE
ICAVLAAVTEVIRSQGGKETETEYFAALMTTLEAVESSESLAAVAYLLSLVMKRVPAPVL
IKKFSDTAKAFMDVMSKQATADCVSCVRWILSCLATLLRKQDLSVWSYPSTLQVYHGLLS
FTVHSKPKVRKAAQQGVCAILRGSDCMFGDNAPNHHPAAITTAKYCIKEMEQAGGSKEDT
TTLHVLGLLKELITAFPHSSVKSCCETLLRVMTLSHVLVTASAMQAFHKLFSGKPNPSAM
SAELNAQIITALYDYIPSENDLQPLLAWLAVMEKAHVHLSSLQSALSLGHLPRLFSASMS
CLLSPHTQVVSAATQTLKTLINECLAPHMAEIGPVLPSASAGNGLYLCKMFRVVEEGLSY
RFHASWPFVLQVLGCFYRAAGKQAHPVMVKSLQSLSDLRATPQFPFCGELDLAVGGAVES
MGPQVVLNAVPLLITGIDDDLEFPRSWLIPVIRDNVKNTQLEFFTSYFLPLGATLKQRAV
ELEKTGQKLVAKVYQTLDLQIWTMLPGFCTKPTDLVSSFKSIARSLGMAITERPDLRMCI
YQALRTLIHKSCETEEEKAEVGRFAKNFLPILFNVHTQQLAPGESDPSRLAVLDTIRAYL
TVSDHKMVGSFLQKALERLSSPDSTEFTRLTVMDLVVAMSAFVDEEAMTHTYEQIKPYLE
SKNSGIQKKAYRVLEEMCGGEREPCKRFVLANLEQLKVVLLDNLKNASSPAKRPRLKCLS
HIVKQLNKEHEDFITALLPEVIICTKEVSIGARKNAYSLLVEIGNAFIRFCGDSTDALDM
YLGHVYIGLTGSVTMITCTVLALTRIVFQFKDSIDVSPLEQLLRNICLLLTCRTREIVKA
SLAFIKVILFILDVKVLASHVTVIMEGIGAIKDDMRRHCRANLKNIFTKLIRKFGFELVK
SMLPAEFHKVLANIRKVEARTKRRKLLNKGEEDGSDSDEDTPKAKTDSIEDVLAETDSDD
SEDEKPKKGQKKPVKQKAKAWLKEGVSDEPLNFLDPKAAQRVLSTNPDLKKTPKIDHGFK
VTSDGRLIIKDDDEEDDGSKDDQELDDILKEAGVKTKKSQKRKIEDDMEDDMGIEPQMKY
KAGGSGIHRPLGGREESGADYKAKKGKGDIKKKGKHDPYAYIPLKKVQLNRRKKAKLQGQ
FKGMVKGAKKGALSGKKMQKNKRRT
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatccggtaaacttcgctctggaaccgctcagaaattaaagcgatggaagaaa
ggacacagcagcgattcaaacccacagacgagtcgatatcgacaagctgccagaagccgg
tttttcagccggcccatagaaaaaagtgatcttacggtcgatgctttaaaactccataat
gagcttcagacgggttctctgggaagaaagaaagatggtttggaggatgccatggaggag
accacagccctcactgagaggacatcaggcacatttctgagtggactgtctgattgttca
aatctgacatttagaaaagttcagcgatactgggagtccaactctgctgcacacaaagag
atctgtgctgtactggcagctgttacggaagtgattcgctctcaagggggaaaggagaca
gagacggaatactttgctgctttgatgacgacccttgaggcagtcgagagcagtgagtct
ctggctgctgttgcctacctactcagcctggtaatgaaaagggtgcctgctccagtgttg
ataaagaaattctcagacacagcgaaggcctttatggatgtcatgtctaaacaagccact
gctgactgtgtgtcttgtgttcgatggatcttgtcttgtctggccactttgctgaggaag
caggatctctctgtgtggagttatccatctactctgcaggtgtatcatggcctactcagc
ttcactgtccattccaagccaaaggtgcgtaaagcagcgcagcagggagtgtgcgccatc
ctgcgtggcagcgactgcatgtttggagataatgctcccaaccatcaccccgctgccatt
accacagccaagtactgcattaaagagatggagcaggcaggaggcagcaaggaagatacg
accacactgcatgtgctggggcttctgaaagagctgattactgcatttcctcacagctca
gtgaagtcttgctgtgagactcttcttcgtgtgatgaccctgagtcatgtgcttgtgaca
gccagcgcgatgcaggcatttcacaaactcttcagcggaaaaccaaacccctcagctatg
tctgcagagctcaatgcccagattataacggctttgtatgactacatccccagtgaaaat
gatttgcagccactgctagcgtggcttgctgttatggagaaagcccacgttcatttatcc
agcttgcagagcgctttgagtctgggtcaccttcctcgtctgttttccgcttccatgtcc
tgtctcctttccccacacacacaggtcgtctctgctgccacacaaactctgaagaccctg
atcaatgagtgtctggcccctcatatggcagagatcggtcctgttctacccagtgcatct
gccggaaatgggctttacctctgtaaaatgttccgtgttgtggaggagggcttgtcctac
cgcttccatgcttcatggccttttgtgctgcaggttcttggctgcttctacagggctgca
gggaaacaggctcatcctgttatggtgaagagtctgcagtctttaagtgacctgcgtgcc
acaccacagttcccattctgtggagagttggatttggcagtaggaggtgcagtggagagc
atgggcccacaggtggtcctcaatgctgtcccacttctcatcacagggatagatgatgac
ctggagtttccacgcagctggcttataccagttatcagagacaatgtaaagaacactcag
ctggaattctttacctcatacttccttcccctgggagccacactaaaacagagagcagtt
gaattggagaagactggacagaagctggtggcaaaagtttatcaaacattagatttgcag
atatggacgatgcttcctgggttctgcaccaagcccacagacttggttagttcatttaag
agcattgcccgctcgctgggtatggctatcactgagcgccctgatctccgcatgtgcatc
taccaagccctgcgcacactaatccacaaaagctgtgagacagaggaggagaaggcagaa
gtgggccgctttgctaagaactttttgcccattctgtttaacgtgcacacacagcagctt
gcacctggggaaagtgacccatccaggctggctgtgctggacaccatcagagcttacctg
acagtctctgaccacaagatggtaggctcttttctgcaaaaagccttggagaggctcagc
agccctgacagcactgagtttacccggctaacagtgatggatttagtggtagcaatgtct
gcatttgtggacgaggaggcaatgacgcacacatacgaacaaatcaagccctatttggag
agtaagaactctggtattcagaagaaagcgtaccgggtgttggaggagatgtgcggagga
gaaagagagccatgtaagcgcttcgtcttggctaatctggaacagctaaaggtggtcctt
ttggacaatctgaagaacgcatcctcacctgccaaaaggcccagactgaagtgcctcagt
catattgtgaagcagctaaataaggagcacgaggacttcatcacagcacttcttcctgag
gttataatttgcacgaaagaagtttctatcggggcgcgcaaaaatgcttactctctcttg
gtggagatcggcaatgcctttatccggttctgtggagactccacagatgccttggatatg
tacctgggccatgtgtacattggactcactggatcagtcacgatgattacctgcactgta
ctggcccttaccagaattgtatttcagttcaaagactcaatagatgtatcaccactggag
cagctcctgcgcaacatctgcttgctgctcacctgcaggacccgggaaattgtcaaggcc
tcattagccttcatcaaagtcatcctcttcatcctggatgtaaaagttctagccagtcat
gtgactgttattatggagggcattggtgctattaaagacgatatgagaagacactgcagg
gcaaacctgaaaaacattttcactaaattaatccgcaagtttggttttgaactggtcaag
agcatgctgcctgcagaatttcacaaagtcttggcaaacatccgtaaagtggaggccaga
acgaagaggcgcaaactgctgaacaagggtgaggaggacggttcagacagcgatgaagac
acccctaaagccaagactgacagtattgaggatgtcctggcagagacggactctgacgac
tctgaggatgagaagcctaaaaaaggccagaagaagccagttaaacaaaaggcgaaggcc
tggctgaaagaaggagtgtctgatgaaccactcaactttctggatcctaaagcagcacag
agagttctttccaccaaccccgacttgaagaagactcccaaaatcgaccatggctttaag
gtgacatcagatggaagattaattattaaagatgatgatgaggaagatgatggatccaaa
gatgaccaggaactcgatgacatcctgaaagaggctggagtgaaaacaaaaaagagccaa
aagaggaaaattgaagatgatatggaagatgatatgggaattgagccacaaatgaaatat
aaagctggtggcagtggaattcacaggcctcttggaggaagagaagagtcaggtgctgat
tacaaagctaagaaaggaaaaggtgacattaagaagaaggggaaacacgacccatatgcc
tacatccctcttaagaaggtgcaactcaaccgcaggaaaaaggcgaaactgcagggccag
tttaagggcatggtcaaaggagcgaagaagggagcattgtctggaaagaaaatgcagaaa
aataagaggagaacatga
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