Silurus meridionalis (southern catfish): 124376835
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Entry
124376835 CDS
T08004
Name
(RefSeq) teneurin-3 isoform X1
KO
K24473
teneurin
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124376835
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
EGF-like domain-containing proteins
Other EGF-like domain-containing proteins
124376835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TEN_YD-shell
TEN_NHL
Ten_N
EGF_Teneurin
EGF_TEN
GBD_Tenm3
Teneurin_ABD
FN-plug_TEN1-4
TTR_TEN1-4
Tox-GHH
EGF_2
RHS_repeat
CarboxypepD_reg
RHS
Motif
Other DBs
NCBI-GeneID:
124376835
NCBI-ProteinID:
XP_046692086
LinkDB
All DBs
Position
2:complement(2415810..3080580)
Genome browser
AA seq
2797 aa
AA seq
DB search
MDVKERRPYCSLRESRREKDRRFTHSSGGENDECRVPTQKSYSSSETLKAFEHDSQRLLY
SSRAKEREHRDTDEYARPGQNFTLRQLGICDPATRRGLAFCSEMGLPHRGYSVGTGSELD
ADNQAVMSPDRAMRLWGGGVKSARSSCLSSRSNSVLTLTDTEHDNKSDSDNGSPMPSPLC
SPSDHSLHHPPRSAESESDDELTHTHCREHTHTAAHEQVANQHHQGPSAPPTLPPAPPPH
KPLVTALNHSSVIGRRNGSPAPPPPAELPTTPESVPLQDSWVLGSNVPLESRKLTKQAVL
QNGHESLIEMDALNPVSHEGSYGDGHFLFKTGTGTTPLFSTATPGYTMATGAVYSPPTRP
LPRNTLSRSAFKFKKSSKYCSWRCTALSAVAVSVLLSIILCYCVSMHLFGLNWQLQETDN
FAFENGQVKPDGTTSNGVTTLSAEHGKGGVYVQENNTIDTGEVDVGRRAVQDVPPGMFWR
SQLFIDQPQSLKFNISLQKDALVGVYGRKGLPPSHTQYDFVELLDGSRLISKEKRGLVEM
EGSLRRARSVNVHEAEFIRFLDSGIWHLAFYNDGKNTEQVSYNTIIIDSVTECPHNCHGN
GDCRSGTCHCFPGFLGPDCSRAACPVLCSGNGQYSRGRCLCYSGWKGTECDVPNNQCIDI
HCGGHGICIMGACVCNSGYKGDNCEEVDCVDPSCSGRGVCIRGVCHCNAGFSGPSCELQK
ALCPEQCSGHGKFQSDSGTCTCDENWTGPDCAIEVCAVDCGTHGVCMGGSCRCEEGWTGS
VCDVKACHPRCTEHGTCKDGKCECHQGWTGEHCTVAHPETYVQGERIGFKEGCPGLCNSN
GRCTLDQNGWHCVCQPGWRGAGCDVAMETLCADGKDNEGDGLADCMDPDCCLQTTCVSQP
FCRGSPDPADIITHGQSASPQQAAQSFYQRISFLLGPEGTHIITGENPFNKSLASIIRGQ
VLTADGTPLIGVNVSFVNFPDHGYTITRQDGMFDILANGGASLTLSFERSPFLPQQRTVW
LPWNVFYVMDTLVLKKEQNDIPSCDLSGFVRPSPLIVTTPLSTFFRSAPENGPIIPETQV
LQEDTAIPGSDLNLVYLSSRAAGYRPVLKVTMTQSTIPFNLMKVHLMVAVVGRLFQKWFP
AEPNLSYTFIWDKTDAYNQRVYGLSEAVVSVGFEYESCLDLILWEKRTAVLQGYELDASN
MGGWTLDKHHVLDVQNGILYKGNGENVFISQQPPVISSIMGNGRRRSISCPSCNGQADGN
KLLAPVALACGSDGSIYVGDFNYIRRIFPSGNVTSVMELRNKDFRHSNNPAHKYYLATDP
MSGQLYVSDTNSRRIFRPKVLTGVKELLQNAEVVAGTGEQCLPFDENRCGDGGKANEALL
LGPKGIAVDKNGLIYFVDGTMIRKVDRNGIISTLLGSNDLTSARPLTCDTSMHIGQVRLE
WPTDLAINPMDNSIYVLDNNVVLQITENRQVRIVAGRPMHCQVPGIEYALGKRAIQTTLE
GATAIAVSFSGVLYIAESDEKKINRVRQVSTDGEITHLAGAPSECDCKNDANCDCYLTGD
GYAKDARLNAPSSLIVSPDGTLYVADLGNIRIRAISRNRPPLALSGFYEVASPAAQELYI
FDVNGTHQHTMSLVTGDYVYNFSYSNEGDVTAVADRNGNTLRVRRDPNRMPVRLVAPDNQ
VIWITISTNGGLKTLTAQGQELTLFTYHGNSGLLATKSTQIGWTTFYDYDSEGRLTNVTF
PTGIITSLIEEMDRALTVDIETSGRDDDVSITTNLSSIDSFYTLVQDQLRNSYQVGYDSS
LRVIYANGMDSHYQTEPHILAGAANPTVARRNMSLPGENGQNLVEWRFRKEQTRGKVIVF
GRKLRVNGRNLLSVDYDRTLRTEKIYDDHRKFLLKIVYDTAGHPTLWVPSSKLMSVNLTY
SSSGQVTSIQRGATVERVEYDSQGRIISRTFADGKSWSYTYLDKSMVLLLHSQRQYIFDF
DLQDRLSAITMPSVARHTMETIRSIGYYRNIYHPPESNASVTVDYTEDGQLLRVAHLGTG
RRILYKYRRQNKISEILYDSTRVSFTYDETAGVLKTVNLQSEGFICSIRYRQIGPLVDRQ
IFRFSEDGMVNARFDYSYDNSFRVTSMQGVINETPLPIDLYQFDDISGKVEQFGKFGVIY
YDINQIISTAVMTYTKHFDVHGRIKEIQYEIFRSLMYWITIQYDNMGRVTKREIKIGPFA
NTTKYSYEYDVDGQLQTVYLNEKMMWRYSYDLNGNLHLLNPGNSARLTPLRYDLRDRITR
LGDVQYRMDEDGFLRQRGTEIFEYNSKGLLVRVHSKANGWTIQYRYDGLGRRLASRNSLG
QHLQYFYADLNYPTRITHVYNHSSSEITSLYYDLQGHLFAMEISSGEEFYIACDNTGTPL
AVFSSNGLLLKQVQYTAYGEIYFDSNPDFQLVIGFHGGLYDPLTRLLHFGERDYDIPAGR
WTTPDISTWTRVGKDPAPFNLYMFRNNNPISKVHDVKEYVTDVNIWLVTFGFHLHNAIPG
FPIPKFDLTQPSLEMRKSQLWDDLPAISGVQEEVTRQAKAFLSFERMPEIQFSRRRSAWD
KPWLWFATVKSLIGRGVMLAITSKGQVATNALNIANEDCIKVAAVLNNAFYLEDLHFTIE
GRDTHYFIKTSLPESDLGALRLTSGRRSLENGVNVTVSQSTTVVNGRTRRFADVELQYGS
LALHVRYGMTLDEEKARVLEQARQRALASAWQREQQRVREGEEGARLWTEGEKRQLLSSG
KVLGYDGYYVLSVEQYPELADSANNIQFLRQSEIGKR
NT seq
8394 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaaggagcgcaggccgtactgctcgctgagggagagtcgcagagagaaagac
agacgctttacacactcgtctggaggagaaaacgacgagtgtcgtgtccccacacagaaa
tcctacagctcgagcgaaacactcaaagccttcgagcacgactcacaacgtctgctgtac
agcagccgtgctaaagagagagaacaccgggacacggacgagtacgcccggccagggcag
aacttcaccctgaggcagttgggaatctgtgatccggccacgcgtcgtgggttagcgttc
tgctctgagatgggcctcccccatcgtgggtactcggttggtacaggctcggagctggat
gctgacaatcaggccgtgatgtcaccggatcgcgccatgcgtctgtggggcgggggagtc
aagtccgcacgcagctcctgcctgtcgagccgatccaattcagtgctcacgctcacagac
accgagcacgacaacaagtccgacagcgacaatggttctcccatgccatcccctctctgc
agtccatctgatcactcacttcatcatccgcctcgcagcgcagagtccgagtcggacgac
gagctcacacacacacactgcagagagcacacacacactgcagcccatgagcaagtggcc
aatcagcatcaccagggcccctcggctcctcccaccttgcctccggctcctccccctcac
aagccgttggtgacggcgttgaaccacagctcagtgattggccggcggaacggaagcccc
gcccctcccccgcccgccgagctgcccaccacacccgagtccgtcccgctgcaggacagc
tgggtcctgggcagcaatgtgccactggagagccgaaaattaacaaagcaagcagttctc
caaaacggccatgagagcctgatagagatggatgcgttgaatcccgtgagccacgagggc
agctatggagatgggcacttcctctttaagacaggcacaggaacgacccctctgttcagc
acggccactccgggctacaccatggctacgggggcggtgtattcgccccccacgaggccc
ctgccccgaaacacgctgtcccgcagcgccttcaagttcaaaaagtcgtcgaagtactgc
tcgtggaggtgcacggctctcagcgcggtcgccgtgtccgtcctgctgtccatcatcctc
tgctactgcgtctcgatgcatctgtttggattgaactggcagctgcaggaaacggataat
tttgcgttcgagaatggacaggtcaaaccggacggcacaacatctaacggagttaccaca
ctgtcagctgagcacggtaaagggggtgtgtatgttcaggagaataacactatagacaca
ggtgaggtggatgtggggagacgggcggtgcaggatgttcctcccggaatgttctggcgt
tctcagctcttcattgatcagccacagtcgctcaagttcaacatctcgctgcagaaagac
gcccttgtcggagtgtatggacgtaaaggcctgccgccgtcacacacacagtacgacttc
gtggagctgctggacggcagccgattgatctcgaaggagaagcgaggcctggtggagatg
gagggatccctgaggagagcgagatcggtgaatgtccatgaggccgagttcatccgtttc
ctcgactcggggatctggcacctggccttctacaatgacggaaagaacaccgagcaagtc
tcctacaacaccatcattatcgattctgtgacagagtgtccacacaattgccatggcaac
ggagactgtcgctcaggaacgtgtcattgtttcccagggttccttgggcctgactgttca
cgagctgcgtgcccagtgttgtgtagtgggaatggacagtactccagggggcgctgtctg
tgctacagcggctggaaaggcaccgaatgtgacgttccaaacaaccagtgcatcgacatc
cattgtggaggccatggcatctgcatcatgggcgcatgtgtgtgcaactccgggtacaag
ggcgataactgcgaggaagtggactgtgttgatccatcgtgttcaggccggggtgtgtgt
atccgaggtgtgtgtcactgtaacgccgggttttcaggcccgagctgtgagctgcagaaa
gccctctgtcctgaacagtgttctggtcacggaaagttccaaagcgacagcggaacctgc
acctgtgatgagaactggactggaccggactgtgctatcgaggtgtgtgcggtggactgc
ggcacacacggagtgtgtatgggcgggagctgccgctgtgaggaaggctggaccgggtca
gtgtgtgatgtgaaggcgtgtcacccgcgctgcactgaacatggaacctgcaaagacggc
aagtgtgagtgtcatcagggctggaccggagagcactgcactgtggctcacccggagacg
tatgtccaaggagagaggataggatttaaagagggatgcccgggtctatgtaacagtaat
ggccgctgcactctggatcagaacggttggcactgtgtgtgtcagcctggatggaggggg
gctggctgtgacgtcgccatggaaaccctctgcgcagatggcaaggacaacgaaggagac
ggcctagcggactgcatggacccggactgctgtctccagaccacgtgtgtgtcacagccg
ttttgccgtgggtctcctgaccctgctgacatcatcacccatggccaatcagcttctcct
cagcaggcggcgcagtccttctaccagcgaatcagctttctgctcgggccagagggcaca
cacattatcacgggagagaacccattcaacaagagcctggcgtctataatccgaggtcag
gtactgactgcagatggaactccgctgatcggagtgaacgtctccttcgtaaatttcccc
gaccatggatacaccatcacccgacaggacggcatgtttgacatcctggccaatggcggt
gcgtctctgaccctgagttttgaacgctctccattcctgcctcagcagcgcaccgtgtgg
ttgccatggaacgttttttacgtgatggacacgctggtgctgaagaaggagcagaacgac
attcccagctgcgacctgagcggatttgtgaggcccagcccactcatcgtgaccacgccc
ctttctaccttctttagatctgcacctgagaacggacccatcatcccagagacacaggtt
ctccaggaggacacggccatccccgggagcgacctgaacctggtgtacctgagttctcga
gcagccgggtatcgcccggtcctgaaggtcaccatgacccagtccaccattccctttaac
ctgatgaaggttcacctgatggtggctgtggtgggacgactcttccagaagtggttccct
gcggaacccaatctctcctacaccttcatctgggacaaaactgacgcctacaaccagcgt
gtgtacggcctgagcgaggcggtcgtgtcggtggggtttgagtacgagtcatgtttggat
ctgatcctgtgggagaagaggaccgcagtcctgcagggttatgagctggacgcctccaac
atgggcggctggacgctagacaaacaccacgtgctggacgtccagaacggtattctgtat
aagggcaatggggagaatgtgttcatttcccagcagccccctgtgatcagcagcatcatg
gggaatgggcggaggcgcagtatctcctgccccagctgtaacggtcaggccgatgggaac
aagcttctggcgccggtggctttggcctgcggatcggacggcagcatctacgtgggagat
tttaactacatcagacgcatctttccttcaggaaacgtcaccagcgtgatggagctcaga
aataaagacttcagacacagcaacaatccagcgcataagtactacctggcgacggatccg
atgtcagggcagctgtacgtgtccgatacgaactcacggcggatcttcagacctaaagtt
ctgacaggggtgaaggagctgctgcagaatgctgaggtggtggcaggaactggagagcag
tgtttacctttcgacgagaaccgctgtggagatggagggaaggccaatgaggccctgctg
ctgggtcctaaaggtattgctgtggataaaaatggattaatctactttgtggacgggacg
atgatccgcaaagtcgaccgcaacggcatcatatccacactgcttgggtcaaacgatctg
acctctgcacgacctttgacctgtgacaccagcatgcatattgggcaggtgcgattggag
tggccaacagacttggccatcaaccccatggataattcgatttatgtgctagacaacaac
gttgttcttcagatcacggagaaccggcaggtgcgcatcgtagcgggacgtcccatgcac
tgtcaagttccaggcatcgagtacgcgctgggaaaacgtgccatccagaccaccctggag
ggggccactgccatcgccgtgtccttcagcggcgtgctgtatatcgccgagagcgatgag
aagaagatcaaccgtgtacgacaggtgagcacagacggagagatcacgcacctggcgggg
gcgccatccgagtgtgactgcaagaacgacgccaactgtgactgctacctcacgggagat
ggctatgctaaagatgctaggctaaatgccccgtcctcgctcatcgtctctcctgatggg
actctgtacgttgccgatttgggcaacatccgtatccgagccatttcacgaaaccgtcct
cctcttgcattgtctggattttatgaggtggcgtctccggctgcgcaggagctctacatt
tttgatgtgaacggcacgcatcagcacaccatgagcctcgttactggggactacgtgtac
aacttcagctacagcaacgagggtgacgtcaccgccgtcgccgaccgcaacggcaacacg
ctgcgcgtccgccgggaccccaatcgcatgcctgtgcgcctcgtcgcccccgacaaccag
gtgatctggatcaccatcagcaccaatggaggtctaaaaacgctgacggcgcaggggcag
gaacttacgctcttcacctaccacggcaacagcggcctactcgccaccaagagcacccag
atcggctggaccaccttctacgactatgacagtgagggacggctgacaaacgtcaccttc
cctacaggtattatcaccagtctgattgaggagatggaccgagcgctcacagtggacatc
gagacctccgggagagacgatgacgttagcatcaccactaacctctcctccatcgactct
ttctacacccttgtacaagatcagttgaggaacagttatcaggtgggttatgacagctct
ctgagggtcatttacgccaacggtatggactcgcactaccagaccgagcctcacatcctg
gcgggtgcagcgaaccctacagtggcccggaggaacatgagcctgcctggagaaaacggc
cagaacctggtggagtggagattcagaaaagagcagactcgaggcaaggtcatagtgttc
ggacgaaagctgagggtaaacgggaggaacctgctgtcggtggattacgaccgaactctg
aggacggagaagatttacgatgatcaccgtaagttcctgctgaagatcgtgtacgacacg
gcgggtcaccctacactgtgggttcccagcagtaaactcatgtcggtgaacctgacctac
tcgagcagcggtcaggtgacaagcatccagcgaggggccactgtggagagggtggagtac
gacagccaggggcgcatcatctccagaacctttgctgatggcaagtcgtggagctacact
tacctggacaagtccatggtgctcctgctccacagccagcgacagtacatcttcgacttt
gacctacaagacaggctctctgccatcaccatgcccagtgtggcgcgtcacaccatggag
accattcggtccatcggctactaccgcaacatctatcatccacctgagagcaacgcctcg
gtcaccgtggattacaccgaggacggacaacttctccgtgtggcacacttgggcactggg
cgccgcatcctctataagtacaggaggcagaacaagatctcagagatcctgtatgacagc
acacgtgtgagtttcacgtatgacgagactgccggcgttttgaagacggtcaacttgcaa
agtgaaggttttatctgctccatccgatatcgccagatcggccctttagtggacagacag
atctttcgattcagcgaggacggcatggtcaatgcccgctttgactactcgtatgacaac
agcttccgggtcaccagcatgcaaggggtcattaacgagacgccgcttcccatcgacctt
taccagttcgatgacatttctggcaaagtggagcagtttggcaagttcggagtgatctat
tacgacatcaatcagattatctcgacagcagtcatgacatacactaagcactttgatgtc
cacggccgcatcaaagaaatccagtatgagatcttccggtccctcatgtactggatcacc
atccagtatgacaacatgggccgggtcaccaagcgcgagatcaagatcggaccttttgca
aacacgaccaaatacagctatgagtacgacgtggatggccaactgcagaccgtttacttg
aacgagaagatgatgtggcgttacagctatgatctcaacggcaacctgcacttgctaaac
ccgggtaacagcgctcgcctcacgccgcttcgttatgatcttcgtgatcgcatcacgcgc
cttggcgacgtacagtaccggatggacgaagacggattcctgcgccagagaggcaccgag
atcttcgagtacaactccaaaggcctactggtacgagtccatagcaaggccaatgggtgg
actattcagtatcgttacgatggattggggaggcgactggcatcccgtaacagcctcggc
cagcaccttcaatacttctatgccgacctgaactaccctacacgtatcacccatgtctac
aaccattccagctcagagatcacctcgctctactatgacctccaaggccacctgtttgct
atggagattagcagtggagaggagttctacatcgcctgtgacaacaccggaactccacta
gctgtcttcagcagtaatgggctgctacttaagcaggttcagtacactgcttatggagag
atctactttgactccaaccctgactttcagctggtaattgggttccatgggggattgtat
gacccacttacaaggctccttcactttggagaacgagactacgacatccctgctggccgc
tggaccactccagatattagcacctggaccagagtgggaaaagatcctgccccatttaac
ctgtacatgttccgcaataataaccctattagcaaagtgcatgatgtcaaagagtatgtt
acagatgtcaacatctggctggtaacatttggcttccatcttcataatgccatccctgga
ttcccaattcctaaatttgaccttacacagccatcactggagatgagaaagagtcagctc
tgggatgatcttccggccatctcaggcgtccaggaggaggtgacacgacaggccaaggcg
ttcttatctttcgagaggatgccggagatccagtttagccggcgccgcagtgcatgggat
aaaccctggctgtggttcgccaccgtcaagtcgttgatcggtagaggcgtgatgcttgcg
atcaccagcaaaggccaagttgccacaaatgccctgaacattgccaacgaagactgcatc
aaggtggccgcggtgctgaacaatgccttctacctagaagacctgcatttcacaattgag
ggtcgcgacacacattactttattaaaacaagccttcctgaaagtgacctgggggccttg
cggctgacgagcggccggcgtagcctggagaacggcgtgaatgtgaccgtgtcccagtcc
accaccgtagtgaacgggcgtacgcggcgcttcgcagacgtagagctacagtacggctcg
ctggcgttgcatgtacggtacggcatgacactggatgaggaaaaggcaagagtgcttgag
caggccaggcaacgagctctcgcaagcgcatggcaaagagaacagcaaagggtccgagag
ggcgaagaaggtgccaggctctggactgaaggtgagaaacggcaactactgagctcagga
aaggttctgggctatgacggctactacgtcctctctgtggagcagtaccccgaactagcc
gacagtgccaacaacatccagttcttgaggcagagcgagatcgggaagaggtaa
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integrated database retrieval system