Silurus meridionalis (southern catfish): 124376978
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Entry
124376978 CDS
T08004
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
124376978 (gpcpd1)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
124376978 (gpcpd1)
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GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
Motif
Other DBs
NCBI-GeneID:
124376978
NCBI-ProteinID:
XP_046692173
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All DBs
Position
23:14988181..15008517
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AA seq
669 aa
AA seq
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MDSFQVTLTVRGATSVGEVIAVVGSCETLGSWCHQKALPLQPAEEDGNLWKRTITVSKGV
AVSYRYFKGFFLESKNASGPCQVIVNNWETHQQPRSLSSSESDHEIDDGQFGFCNGAEYV
DSGWLTCQTEIRLRLHHSVKPPVSITKKKYKTSRFRLKLMVEGTEEEEDDESPSCWHKMA
NTLEISMISDCGYKSRHSQPECGYALEAPTWTEYSIHTMEPDNLELVFEFFEEDLSEKVV
QSDVHPGQVGTACLLSSTFQESGKDNGVVTLPIMGRNSRQTIGKVRVDYLVIRPIRGFKC
DMSQCYTKYWRKRSALDVGHRGAGSTHAAKHHKIRENTIASFLSAANHGAAYVEFDVHLS
KDLVPIVYHDLTCCISTKKKNDKNSMVLVEVPVKDLTFDQLQLLKLAHSTALKVHDHKDL
QDEEEYIDEHQPFPSLHQLFHTVPDNVGFNIELKWISQMKDGTWDGNLSSYFNMNQFLDI
ILTCVLQNAGKRRIVFSCFDPDVCAMVRRKQNKYPVLFLTQGVSEVYPQLMDIRCQTTQI
AMSFAQSENILGISAHTEDLLRNMDCITEAQSKGLVVFCWGDDNNVHENRKMLREKGING
LIYDRICEDNIEQSNIFKVEEKVSIKEVIPEKTLKNCQCSMYSISCSTVCCSGEVRSGSG
ESDSGLSSS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggactcttttcaagtgacgctgactgtgagaggagcgacatctgtcggtgaagtgatc
gcagtagttggaagctgtgagactcttggcagctggtgccatcagaaagcactacctctt
caacctgcagaggaagatggcaatctatggaaaaggaccatcacagtttcaaagggagtt
gcagtcagctatcgctattttaaggggttcttcctggaatcaaagaatgcaagtggtcca
tgtcaagtcatagtcaataattgggagacccatcagcagcctcggtcattgagttcctca
gaatcggaccatgaaattgacgacggccagtttggattctgtaatggtgctgaatacgtg
gactctggctggttgacatgtcagacagagatccgcctacgtctccatcactctgttaag
ccgccagtgtccattaccaagaaaaaatacaagacatctcgctttagactgaaattaatg
gtggagggaactgaagaggaggaggatgacgagagcccttcatgctggcacaagatggct
aacacactagagattagtatgatcagtgattgtggctataagtcccgtcactcacaacca
gagtgtggctatgccctggaggcaccaacttggactgagtacagtattcacactatggaa
cctgacaaccttgagcttgtgtttgagttttttgaggaggacctaagtgaaaaagtcgtt
cagagtgacgtccacccaggtcaggtcggcaccgcctgcctcttatcttctacctttcag
gaaagtggcaaggataatggagtggttacactcccaataatgggcagaaattccaggcag
actattggaaaagtcagagtggactacctggttattcggcctattcgaggttttaagtgt
gacatgagccagtgctacactaagtactggagaaaacggagtgctttggatgtgggccac
agaggagcagggagcacacatgctgccaaacatcacaagatcagggaaaatacaattgcc
tcatttctaagtgctgctaatcatggtgctgcctatgtggagtttgatgtccatctgtct
aaggacttggttccaatcgtgtaccatgatcttacttgctgtatttccactaagaagaaa
aatgacaagaattcaatggtgttggttgaagttcctgtgaaagatttgacatttgaccag
cttcagcttcttaaacttgcccactctacagctttgaaggtgcatgatcacaaagattta
caggatgaggaggagtatatagatgaacatcagccatttccttcacttcatcagctcttt
cacacagtcccagacaatgtaggctttaatattgagctgaagtggatatcccagatgaag
gatggcacctgggatggaaacctgtccagttattttaacatgaaccagttcctggatatc
atccttacctgtgtgttgcagaatgctggaaagagaaggattgtcttctcttgttttgat
cctgatgtgtgtgcaatggtgcggagaaagcagaacaaatatcccgtccttttcctgact
cagggtgtgtcagaggtctaccctcagctgatggatatacgctgtcagaccacgcagatt
gccatgagctttgctcagagtgagaatatcctgggtatcagtgctcacaccgaggatctg
ttgcgcaacatggactgcattacagaggcccagtctaaaggactggtggtcttctgctgg
ggagatgacaacaatgtccatgagaacaggaaaatgctcagggagaaaggcatcaatgga
ctcatttatgacagaatctgtgaggataacatcgagcagtccaacatctttaaagtagaa
gagaaagtgtctataaaggaggtgattcctgaaaagacgctgaagaattgtcaatgctcc
atgtatagtatttcctgctcaactgtgtgttgctccggcgaggttcgatcaggtagcggc
gagtcagactcaggcctcagctcgtcttaa
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