Silurus meridionalis (southern catfish): 124376992
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Entry
124376992 CDS
T08004
Symbol
wdr21
Name
(RefSeq) WD repeat domain 21
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124376992 (wdr21)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124376992 (wdr21)
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GFIT
Motif
Pfam:
Beta-prop_DCAF4
WD40_CDC20-Fz
WDR55
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_EIPR1
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
124376992
NCBI-ProteinID:
XP_046692199
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Position
23:23582043..23589762
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AA seq
498 aa
AA seq
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MRRGNWRGRRNRRHHHHDSSEWRKRNHPSEPPESSDRSSGSDSASSSGSSAPAPELPGFY
FDPEKNRYFRLLPGHNNCNPLTRELLEKKEQERKRTMLLLEDEQVRKKSPRTGLNSTLLL
QRRRLGELHPNSYCRLVHEVKVSEMKRRKLELQSVDASSSNADNFRLIVADSACERVFTV
NDVSHGGCKYGIMKFGGCGNGSLSAQMCDNLYFTNRKVNSVCWSSVTHSDSHVLLCLVGI
SQTPGCVSLLPASLFNNSNPDQPGMLCSFKISTAWSCAWCLNPQADKTFSTGLSRSVIVT
DVVTGRRQTYSTGSDVLAQQFAVRAPVLFNGCRSGEIFSIDLRQRGRGRDHSWKSSRFHQ
DSAVTSIRLLQDENYLLAADMLGKIKLWDVRVKRAAMQYEGHHNEYAYLPLHLCEQEGLL
LAVGQDCYTRLWSLRDGHLLRTIPSPHPAEKDSIPNVVFSSRLGGRRGLPGLLMAVCNNL
YYYPYGDFQDGTLCETRG
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaggagagggaactggagaggaaggaggaacagacgccatcatcatcatgacagttct
gagtggagaaagaggaaccatccatcagagccacctgaatcatcagacagaagttcagga
tcagactctgcttcatcctccggatccagcgctcctgctccagagttgcctggtttttac
ttcgacccggagaagaaccgttacttccgtctgctgccgggccacaacaactgcaatcct
ttaacgagggaattgctggagaagaaggagcaagagaggaagaggacgatgctgctgctc
gaggacgagcaggtgaggaagaaatctccacgcactggactcaactccacactgctgctg
cagaggagacgcctgggagaactgcaccccaactcctactgcagattagtacacgaggtg
aaggtcagcgagatgaagcgacgcaagctggagctccagagcgtcgacgccagcagctcc
aacgcagacaacttccgcctgatcgtggcggactctgcgtgcgagcgcgtcttcacggtg
aacgacgtctctcacggaggctgcaagtacggcatcatgaagttcggcggctgcgggaac
ggctctctgtctgcacagatgtgcgataacctgtacttcactaaccgcaaggtgaactcc
gtgtgctggtcgtctgtcactcattctgactctcacgtcctgttgtgcttggtggggatt
tctcagactccaggctgtgtcagtttgcttcccgcgtctctcttcaacaactccaatccc
gatcagcctgggatgctgtgcagttttaagatctcgacagcgtggtcatgcgcatggtgc
ctgaacccccaggctgataaaaccttcagtactggtctttcccggagcgtcatcgtgact
gacgtggtgacgggccgaaggcagacgtacagcacagggagcgacgtattggcccagcag
ttcgctgtccgagccccggtgctgttcaacggctgccgttcaggcgagatcttcagcatc
gacctgaggcagcgcggccgtggacgtgaccacagctggaagtcctcgcgcttccatcag
gactcggccgttacatctatacgcctgctgcaggacgagaactacctcctcgccgccgac
atgctcggaaagattaagctgtgggacgtccgggtgaaacgtgcggcgatgcagtacgaa
ggccaccacaacgagtacgcctacctgcccctacacctgtgtgagcaagaagggctactc
ctcgcagtggggcaggactgctacacacgtctgtggagtcttcgagacggacatctgctc
aggaccatcccgtcccctcaccctgcagagaaggactccatccctaacgtggtgttctcc
tcacggcttgggggacgcagaggacttcccggcctcctcatggccgtctgcaacaacctc
tattactacccttatggggactttcaggacgggacgttatgcgagacacggggttaa
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