KEGG   Silurus meridionalis (southern catfish): 124376992
Entry
124376992         CDS       T08004                                 
Symbol
wdr21
Name
(RefSeq) WD repeat domain 21
  KO
K11799  DDB1- and CUL4-associated factor 4
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smeo04121]
    124376992 (wdr21)
Ubiquitin system [BR:smeo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     124376992 (wdr21)
SSDB
Motif
Pfam: Beta-prop_DCAF4 WD40_CDC20-Fz WDR55 WD40 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st EIF3I Beta-prop_EIPR1 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 124376992
NCBI-ProteinID: XP_046692199
LinkDB
Position
23:23582043..23589762
AA seq 498 aa
MRRGNWRGRRNRRHHHHDSSEWRKRNHPSEPPESSDRSSGSDSASSSGSSAPAPELPGFY
FDPEKNRYFRLLPGHNNCNPLTRELLEKKEQERKRTMLLLEDEQVRKKSPRTGLNSTLLL
QRRRLGELHPNSYCRLVHEVKVSEMKRRKLELQSVDASSSNADNFRLIVADSACERVFTV
NDVSHGGCKYGIMKFGGCGNGSLSAQMCDNLYFTNRKVNSVCWSSVTHSDSHVLLCLVGI
SQTPGCVSLLPASLFNNSNPDQPGMLCSFKISTAWSCAWCLNPQADKTFSTGLSRSVIVT
DVVTGRRQTYSTGSDVLAQQFAVRAPVLFNGCRSGEIFSIDLRQRGRGRDHSWKSSRFHQ
DSAVTSIRLLQDENYLLAADMLGKIKLWDVRVKRAAMQYEGHHNEYAYLPLHLCEQEGLL
LAVGQDCYTRLWSLRDGHLLRTIPSPHPAEKDSIPNVVFSSRLGGRRGLPGLLMAVCNNL
YYYPYGDFQDGTLCETRG
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgaggagagggaactggagaggaaggaggaacagacgccatcatcatcatgacagttct
gagtggagaaagaggaaccatccatcagagccacctgaatcatcagacagaagttcagga
tcagactctgcttcatcctccggatccagcgctcctgctccagagttgcctggtttttac
ttcgacccggagaagaaccgttacttccgtctgctgccgggccacaacaactgcaatcct
ttaacgagggaattgctggagaagaaggagcaagagaggaagaggacgatgctgctgctc
gaggacgagcaggtgaggaagaaatctccacgcactggactcaactccacactgctgctg
cagaggagacgcctgggagaactgcaccccaactcctactgcagattagtacacgaggtg
aaggtcagcgagatgaagcgacgcaagctggagctccagagcgtcgacgccagcagctcc
aacgcagacaacttccgcctgatcgtggcggactctgcgtgcgagcgcgtcttcacggtg
aacgacgtctctcacggaggctgcaagtacggcatcatgaagttcggcggctgcgggaac
ggctctctgtctgcacagatgtgcgataacctgtacttcactaaccgcaaggtgaactcc
gtgtgctggtcgtctgtcactcattctgactctcacgtcctgttgtgcttggtggggatt
tctcagactccaggctgtgtcagtttgcttcccgcgtctctcttcaacaactccaatccc
gatcagcctgggatgctgtgcagttttaagatctcgacagcgtggtcatgcgcatggtgc
ctgaacccccaggctgataaaaccttcagtactggtctttcccggagcgtcatcgtgact
gacgtggtgacgggccgaaggcagacgtacagcacagggagcgacgtattggcccagcag
ttcgctgtccgagccccggtgctgttcaacggctgccgttcaggcgagatcttcagcatc
gacctgaggcagcgcggccgtggacgtgaccacagctggaagtcctcgcgcttccatcag
gactcggccgttacatctatacgcctgctgcaggacgagaactacctcctcgccgccgac
atgctcggaaagattaagctgtgggacgtccgggtgaaacgtgcggcgatgcagtacgaa
ggccaccacaacgagtacgcctacctgcccctacacctgtgtgagcaagaagggctactc
ctcgcagtggggcaggactgctacacacgtctgtggagtcttcgagacggacatctgctc
aggaccatcccgtcccctcaccctgcagagaaggactccatccctaacgtggtgttctcc
tcacggcttgggggacgcagaggacttcccggcctcctcatggccgtctgcaacaacctc
tattactacccttatggggactttcaggacgggacgttatgcgagacacggggttaa

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