Silurus meridionalis (southern catfish): 124377035
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Entry
124377035 CDS
T08004
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
124377035 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124377035 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smeo03310
]
124377035 (esr1)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
124377035 (esr1)
Nuclear receptors [BR:
smeo03310
]
3. Estrogen like
3A. Estrogen receptor
124377035 (esr1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Oest_recep
Rhomboid_N
Motif
Other DBs
NCBI-GeneID:
124377035
NCBI-ProteinID:
XP_046692256
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Position
23:complement(23045862..23064927)
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AA seq
629 aa
AA seq
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MSGEQASSEAPAGARHRRRSELEGYSASLASLKLSPMYPEEEQRTTGGMSSSAHYLNGTF
EYTTNPEASNSSADYYPAPADLQVAPEPQDESLQPLTNGSSSPLVFIPSGPQISPFISHS
PVGQHAAQQVPYYLETSGTSNYRSDGSSVLASAGSRVDLCSATGRQDVYSTVGASGPSGA
SGTSGAVGLVKEIRYCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYVCPATNQCTI
DRNRRKSCQACRLRKCYEVGMMKGGFRKERGGRIIKHHRRHSGLKRGYGEAKNVSDVREA
PLLDGRGSSGIGIEGRVAGVVYMAPEQVLLLLLRAEPPTLCSRQKHSRPYSELTMMSLLT
NMADRELVHMIAWAKKVPGFQELSLHDQVQLLESSWLDILMIGLIWRSIHSPGKLIFAQD
LILDRSEGECVEGMSEIFDMLLATVARFRTLKLKSEEFVCLKAIILLNSGAFSFCSSPME
PLRNSFMVQCMIDNITDALIHYISQSGISVQLQSRRQAQLLLLLSHIRHMSYKGMEHLYS
MKCKNKVPLYDLLLEMLDAHRLRPLGKLSRNWADRVSSSPNTTPTTPTSSTTTTTTTTTT
HQHNHHSSISTCPTDLQSNPPHPDQSSSP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagagcaggcttcttctgaagctccggctggtgccaggcatcgacgcaggagc
gagctagaagggtattcggcgtctctcgcttccctcaagctctcccccatgtacccggag
gaggagcagcgcaccacggggggcatgtcctccagcgctcactacctaaacgggaccttc
gagtacaccaccaaccccgaagcctcgaactcgtcagcagattactacccggctcctgcg
gatctacaggtggccccggagcctcaggacgaaagcctgcagcctttgacgaacggctcc
tccagcccactggtcttcattccttcgggtccacagatctctccattcatcagccattct
cctgtgggacagcatgcggctcagcaggtgccctactacctggaaacatcaggaacctcc
aattacaggtcagatgggtccagtgtattagccagtgcaggatcaagagtggatctgtgc
agtgccaccgggaggcaggatgtgtacagcactgtgggagcctcgggaccatcaggggct
tcggggacttcaggagcagtggggttggtgaaggagatccgatattgcgctgtgtgcagc
gactacgcctcaggataccactacggagtctggtcctgcgagggctgcaaggcattcttc
aagcgcagcatacaaggccacaacgactatgtgtgtccagcgacaaaccagtgcaccatc
gaccggaaccgcaggaagagctgtcaagcatgtcgtctgcgcaaatgctatgaagtggga
atgatgaaaggagggttccgtaaggagcgaggcggtcgcatcattaagcaccacagaagg
cacagtggactgaaacgaggttatggcgaagcaaaaaatgtttctgatgtgagggaagca
ccactattggacgggcgaggcagctctgggatcgggatcgaaggcagggtagctggtgtg
gtgtacatggctccggagcaggtgttgctgctgctgttgagggcagaaccgcccaccctt
tgctcgcgacagaaacacagccgcccctacagcgagctcaccatgatgagtctcctcacc
aacatggccgacagggagctcgttcacatgatcgcctgggccaagaaagtgcctggattc
caggaactctctctgcatgatcaggtgcagctgttggaaagttcctggctggatattttg
atgattggcctcatttggaggtccatccactcacctggaaaactcatcttcgcacaggac
ctcatactcgacaggagtgagggcgagtgtgtggagggcatgagtgaaatatttgatatg
ttgctcgccaccgtggctcgtttccgcaccctgaaactcaagtcagaggagtttgtgtgc
ctcaaagccatcattctgctcaactctggtgcattttcattctgctcctcccccatggag
cccctgaggaacagcttcatggtgcagtgtatgattgataacattacggacgctctcata
cactacatcagccaatcaggaatctcggtgcagctccagtccaggcgtcaggcccagctc
ctgcttttgctctcgcacatcagacacatgagctataaagggatggagcacctgtacagc
atgaagtgcaagaacaaagtgcctctgtacgatctgctgctggagatgctggatgcacat
aggctccgcccactgggcaaattgtcaaggaactgggctgatagagtgtcgtcttcaccc
aatacaacccccacaaccccgacctcctccaccactaccaccaccaccaccaccaccacc
catcaacacaaccaccacagcagcatctccacgtgtcctacagatttacagtccaaccca
ccgcaccctgaccaaagctccagcccctaa
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