Silurus meridionalis (southern catfish): 124377058
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Entry
124377058 CDS
T08004
Symbol
ppp2r5a
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03015
mRNA surveillance pathway
smeo04110
Cell cycle
smeo04114
Oocyte meiosis
smeo04261
Adrenergic signaling in cardiomyocytes
smeo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124377058 (ppp2r5a)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124377058 (ppp2r5a)
04114 Oocyte meiosis
124377058 (ppp2r5a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124377058 (ppp2r5a)
09158 Development and regeneration
04382 Cornified envelope formation
124377058 (ppp2r5a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124377058 (ppp2r5a)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124377058 (ppp2r5a)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124377058 (ppp2r5a)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124377058 (ppp2r5a)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124377058 (ppp2r5a)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124377058 (ppp2r5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B56
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
124377058
NCBI-ProteinID:
XP_046692305
LinkDB
All DBs
Position
23:17746162..17784050
Genome browser
AA seq
505 aa
AA seq
DB search
MSAVSATEKVDGFTRRSVKKAQKQRKSPSSSRFRSNSTSGELSALPQLKANVHDAPSTEE
QELFVQKLQQCCLLFDFFDSVTDLKSKEVKRATLNELVEYVSTNRGILVESAYLDIINMI
STNLFRTLPPSDNPDFDPEEDEPTLEASWPHMQLVYEFFLRFLENQDFQPSTAKRYIDQK
FVLQLLELFDTEDPRERDFLKTILHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVA
ELLEILGSIINGFALPLKAEHRQFLMKVLIPMHTAKTLALFHAQLAYCVVQFLEKDPTLT
EPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIQELLFKQISKCVTSPHFQV
AERSLYFWNNEYILSLIEENIDKILPIMFNSLYRISKEHWNQTIVALVYNVLKTLMEMNS
KLFDELTASYKADRQREKKKEQEREELWKRLDELKISKSQNNSHGLLNSENSINNNNQSE
EPNSSNMTATDSVNTHIHNTDLCAK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggtctccgccaccgagaaagtggacggcttcactcggagatccgtgaagaag
gcgcagaagcagaggaagtcgcccagctcgtcccgctttcggagcaacagtacctccgga
gagctttccgccctgccgcagctcaaggctaacgtgcacgatgctccatctacagaggag
caggagctgttcgtgcagaagcttcagcagtgttgcctgctttttgacttcttcgactcc
gtcactgatctgaagagtaaggaggtgaagagggccactctcaacgagctggtagaatat
gtgtcgaccaacaggggcatactggtggaatctgcctaccttgacatcattaacatgatc
agcaccaatttattcagaactctgcctccgagtgacaaccctgattttgaccctgaagaa
gatgagcccactctggaggcctcgtggccacacatgcagctggtgtacgagtttttcttg
cgtttcttagaaaaccaggattttcagccgagcactgcaaaacgctacatcgatcagaag
tttgtgctgcagctgttagagttgtttgacactgaagacccccgggaacgagacttcctg
aaaaccatcctgcatcgcatctatggaaaattcttggggttgcgtgcctttatccgcaag
caaatcaacaacattttcttacggttcatctatgagaccgagcattttaatggagtagct
gaacttctggagatcctgggcagcatcatcaatggatttgcgttgcctctgaaggctgaa
cacaggcagtttctgatgaaggtgctcattccgatgcacactgccaaaaccctagcgctc
tttcacgcacagttggcatactgcgtggttcagttcttggaaaaggaccccactcttaca
gagccggtgatccggggacttctgaaattctggcccaagacctgcagccagaaagaggtc
atgttcctgggtgaaatcgaggagattctggacgtcatcgagccgacacagtttaagaag
attcaggaactgctatttaaacagatctctaagtgtgtcacgagtcctcattttcaggta
gcagaacggtcactgtacttttggaacaacgagtatattttgagtctgattgaggagaac
atagacaagatcctgcccatcatgttcaacagcctgtaccgcatctcaaaagagcactgg
aaccaaacgattgtagcactggtgtacaatgtattgaaaactctgatggagatgaacagc
aaactgtttgatgagctcacagcctcgtacaaagccgacagacaacgagagaagaagaag
gagcaggagcgagaggagctgtggaagaggttagacgagctgaagatctccaaaagccag
aacaacagccacggccttctaaactccgagaacagcatcaataacaacaaccaatcagag
gagccgaacagctcaaacatgaccgctacagacagcgttaacacacacatacacaacact
gacctctgtgccaaatga
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