Silurus meridionalis (southern catfish): 124377060
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Entry
124377060 CDS
T08004
Symbol
rtn1b
Name
(RefSeq) reticulon-1b isoform X1
KO
K20721
reticulon-1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124377060 (rtn1b)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124377060 (rtn1b)
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124377060 (rtn1b)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124377060 (rtn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
BTBD16_C
Motif
Other DBs
NCBI-GeneID:
124377060
NCBI-ProteinID:
XP_046692306
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All DBs
Position
23:13174182..13211327
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AA seq
757 aa
AA seq
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MSVKPSDEEASEGAWYGDDLENMELFGKKSTSGRFEEREDEHKQHSQHPPHPVTMETAST
DKSETDLLKKSIIDMGDPYTSLLSGYSSKMDTSYFSGDISGEDQKQKAGMDDLISGLDCQ
SAMFSSDSGIEMTPSAELGYSAHKLRDSDKTPDSTYNYMDIRSREDTHSQQQPLEDWGIS
EAMESAPLSSLRGGHYLEKSPSPVEVETLGPSAAALDSHTFPYVEEPSDDELSDYQANRL
PGAEEGASLVKITLTETPPLSVSPVDIQRSSPVGVSEKESILSLGLQGVPTVTLSEPEDE
SPGSSTPPLTEESDSPSDSMIHATEVKTQEKAPETASLVSQPALKSQSPSLEFKSTPTLP
LYAKVTDASSGDSGDSEIELVSEESSPQAPSSAYMTFSKAPSTPPSAPATTQAPVSVSVP
AFNPPPGLASAPISAAMQYSILREEREAELDSELALESCEEESPKRFLQDSSTKVSKVNT
QPAEPPSPSSTVTAAPPVSPAPPPAAPVSVDAPKEKIASEAENEKTKPSSNISTPSPVLP
ELKVEKPPEERPAERTLSPDIFQGITREKAMELLYWRDVKQTGLVFSSVLLLLFSLTQFS
VVSVGAYLALAALSATISFRVYKSVLQAVQKTDEGHPFKSYLELEMSLSHDQMQRYAEKT
QHYINNTLKELRRLFLVQDLVDSLKFAVVMWLLTYVGALFNGLTLLIMTVVSMFSMPVVY
EKYQAQIDQYLGLIRTQVNTVVGKIQEKIPGAKRKAE
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaagccgagcgacgaggaagcatccgagggcgcgtggtacggagacgatctg
gagaacatggagctgttcgggaagaagagcacctcgggccgcttcgaggagcgcgaggac
gagcacaagcagcactcccaacatccgcctcaccccgtcaccatggaaactgcatctaca
gataaatcagagacagatctcttgaagaagtccatcattgatatgggtgacccatacaca
tccctgctgtccggttattcctcaaagatggatacctcctacttctcgggtgatatcagt
ggagaggaccagaagcagaaggctggaatggatgacttgatctcaggcctggattgccag
tctgccatgttcagctcagactctggtatcgagatgaccccaagtgctgagcttggctac
agcgcccataagctgcgtgactcagacaagacccccgattccacctacaactacatggac
atcagaagcagggaggatacccacagccaacagcagcctttggaggattgggggataagt
gaggcaatggaatctgcccctctatccagccttaggggagggcattacttggagaagagt
ccctcacctgtggaagtggagacattgggaccctctgcagctgcacttgattcacacact
ttcccctatgtagaagaaccatccgatgacgagctctctgactaccaggccaaccgctta
cctggtgctgaagaaggtgccagtctagtaaagatcactttaaccgagacaccccccttg
tcagtctctccagtggacatccagcgttcctcacctgttggtgtttctgagaaagaaagc
atcctgagcttggggctacagggagtgcccactgtcacactgtccgagccagaggatgag
agtccaggatcttccactccaccactcacagaagagtctgactctccatctgattccatg
atccatgccactgaagtgaaaacccaggagaaagctccagaaactgcatcactggtctct
cagcctgccctcaaatcccaaagtccttcactggagtttaagagcactcccactcttccc
ctatatgccaaggttacagatgccagcagtggagactcaggtgattcagagattgagctt
gtgtctgaggagtcaagcccacaggctcccagctctgcctacatgaccttcagcaaggct
cccagcacccctccatcagccccggcaactactcaagctcctgtttctgtctctgtccct
gcctttaaccctccccctggccttgcttccgcccccatctctgcagccatgcagtacagc
atcctgcgtgaagagcgagaggcagagctggacagtgagttggcccttgagtcctgtgaa
gaagagagccctaagagatttctccaggactcctccaccaaggtaagcaaagtcaacaca
caaccagctgaaccaccatccccctcatccacagtgaccgctgctcctcctgtgagccct
gcaccgccacctgctgctcctgtctctgttgatgctcctaaagagaagatagcaagtgag
gcagagaatgagaagacaaaaccaagcagcaacatttcaacccctagtccagtcctgcct
gaactgaaggtggagaagcctcctgaggaaaggccagcagagaggacactttctcctgat
atcttccagggaataactagagagaaggcgatggagctgttgtactggcgtgatgtaaag
cagacaggcctggtgtttagcagtgtgctgctgcttctcttctctctgactcagttcagc
gtggtcagtgtgggggcttacctagccctggccgctctctctgccaccatcagtttcaga
gtctacaagtccgtcctccaggcagttcagaagaccgatgagggacaccctttcaagtca
tatctggagttggagatgtccctgtcacatgatcagatgcagaggtatgccgagaaaacc
cagcactacattaacaacactctgaaggagctgcgcaggcttttccttgtgcaagacctg
gtggattcactaaagttcgcagtggtcatgtggctgttgacctacgtgggcgctctcttc
aatggcctcactctcctcatcatgactgtggtgtccatgttttccatgccggtggtgtat
gagaaataccaggcacaaattgaccagtatttgggactcataaggactcaagtaaacacg
gtggtggggaagatccaggagaagattccaggggcaaagcgaaaggctgagtaa
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