Silurus meridionalis (southern catfish): 124377075
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Entry
124377075 CDS
T08004
Symbol
lft1
Name
(RefSeq) lefty1
KO
K04668
left-right determination factor
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124377075 (lft1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124377075 (lft1)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Transforming growth factors (RSTK binding)
124377075 (lft1)
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Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
124377075
NCBI-ProteinID:
XP_046692331
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Position
23:7758661..7761293
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AA seq
358 aa
AA seq
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MASTLISCFLCAVVLTLGHAFTQDDMKDALLKKLGLDEVPQIHKRDLENLVVPAHVKSKY
VSMLKLHHERRRRSLPSLAGILRGIPGNADISGEFVYSDTTRQRVVFEMTSRIPDNSEVT
MAELKLYKKAPHKRAMPERKGQRPVNNARVSVYWVEVLGNGSNRTSLVDSRLIPIHESGW
KSFDVTQAVHYWSKSERNTPMHLEVWIEGERHGSYAAEMAKSVQFSTQEPSDILGKPELV
LYTLNLEEFGSQGDCEPSKSRETCCREEHFINFRALTWTQYWVIEPAGYRAFRCAGSCRQ
PQRAPHAYGARKCAAVESAPLPMMYLVKKGEYTEIEVAEFPNMIVEKCGCAMDNVSLV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgactttgatctcctgcttcctctgtgcggttgttctgaccctggggcacgcg
tttacgcaggacgacatgaaagacgccctgctgaaaaagctcggactcgacgaggttcct
cagatacacaagcgggacctggagaaccttgtggtgcctgcgcacgtgaagagcaaatat
gtgtctatgctgaagcttcaccacgagaggaggcgccgctctctgcccagtctggcaggg
attttacgcggcattccaggcaacgcagacatctccggggagttcgtgtattccgacaca
actcgtcagcgcgtggtgttcgagatgacctcgaggattcccgacaacagcgaggtgacc
atggccgagctgaagctttacaagaaagcgccacacaagcgagccatgcccgagaggaag
ggccagaggccggtcaacaacgcgcgggtcagcgtctactgggtggaggtgctcgggaac
ggctcgaaccgcacttccctcgttgactccaggttgattcccatccatgagtcgggctgg
aagagcttcgatgtcacacaggctgtacattactggtccaagagcgagaggaacacacca
atgcacctggaggtgtggatcgagggcgagagacacggcagttacgcagcggaaatggcc
aagagcgtccagtttagcacccaggagccgagcgacatcctgggcaaacctgagctcgtc
ctctacacactgaacctggaagagtttggctcccagggcgactgcgagccaagcaaaagc
agggagacgtgctgccgtgaggagcatttcatcaacttccgcgctctgacctggacgcag
tattgggtgatcgagcccgcgggttaccgcgcgttccggtgcgcggggagctgcaggcag
ccgcagcgcgcgccgcacgcgtacggagcgcgcaaatgcgcggcggtggagagcgcgccg
ctgcccatgatgtacctggtgaagaagggcgagtacaccgagatcgaagtggccgagttt
cccaacatgattgtggagaagtgcggctgcgccatggacaacgtgtccctcgtgtga
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