Silurus meridionalis (southern catfish): 124377144
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Entry
124377144 CDS
T08004
Symbol
six1b
Name
(RefSeq) homeobox protein six1b
KO
K15614
homeobox protein SIX1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124377144 (six1b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
124377144 (six1b)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
124377144
NCBI-ProteinID:
XP_046692453
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Position
23:13102668..13105315
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AA seq
279 aa
AA seq
DB search
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENSNAGANKQNQLSPLDGGKSLMSSSEEDEFSPPQSPEQNSALLLQANMN
HPASSYSMSGLAMQSHPHQHQLHDSILGPLTSSLVDLGS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttgccctcgttcggcttcacgcaggagcaggtcgcgtgtgtgtgcgaggtg
ctgcagcagggtgggaacctcgagcgactgggccgcttcttgtggtccttgccggcttgc
gaccacctccacaagaatgagagtgtgctcaaggccaaagctgttgtggcgttccaccgc
ggcaacttcagggagttgtacaaaatcctggagagccaccagttttcgccacacaaccac
cccaaactgcagcagctgtggctaaaagcccactacatcgaggctgaaaagctgaggggg
cgaccgctgggtgcagtgggtaaataccgggtacggaggaagtttcctttaccgcgcacc
atatgggacggagaggagacaagctactgttttaaagagaagagccgcggtgtgctgagg
gagtggtacacgcacaacccatatccctctcctcgggaaaaaagagagctggctgaagcc
acagggctcaccaccacacaagtaagcaactggtttaaaaacaggagacagagggatcga
gccgccgaggccaaagaaagagagaacagcgagaacagcaatgcaggcgcaaacaaacag
aaccagctgtctccgttagacggcggcaagtcgctaatgtcaagctcagaagaggacgag
ttctctcccccgcaaagtcctgagcagaactccgctctcctgctgcaggccaacatgaac
caccccgcctcctcctacagcatgagcggccttgccatgcagagccacccgcaccagcac
cagctccacgactccatactgggacctctgacctccagtctggtggacctgggctcttaa
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