Silurus meridionalis (southern catfish): 124377208
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Entry
124377208 CDS
T08004
Symbol
cdh2
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-2
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124377208 (cdh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124377208 (cdh2)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124377208 (cdh2)
04090 CD molecules [BR:
smeo04090
]
124377208 (cdh2)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
124377208 (cdh2)
Cell adhesion molecules [BR:
smeo04515
]
Cadherins
Major cadherins
124377208 (cdh2)
CD molecules [BR:
smeo04090
]
Proteins
124377208 (cdh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Stevor
DUF2304
CD34_antigen
DUF3139
DUF5385
Motif
Other DBs
NCBI-GeneID:
124377208
NCBI-ProteinID:
XP_046692545
LinkDB
All DBs
Position
23:11907900..11951906
Genome browser
AA seq
904 aa
AA seq
DB search
MRIYRNRTMCKKGCAVLTLVAALQVVLQAEGAMPCQPAFTQQEYSIMVNDIITEGQALLK
VSFTDCGRSSSLHFESSYPEDFRIGKDGTVYASRTLRVSEKKGWSLEISAKDKETQEVWL
TQVTFTLPDTPKQMPEIVFPWRSIVVGGDGSVSRVKRDWVIPPINVPENSRGQFPEELVK
IRSDRDKINTLRYSVTGPGADQTPTGLFIIDPITGQLSVTKPLDREQISNFHLRAHAVDI
NGNQMENPIDIVINVIDMNDNRPEFSHQIWNGTVDEGAKPGTFVMTVTSQDKDDPNTANG
MLRYKILSQSPETPSTNMFTINNKTGKIITVAAGLDREKVSQYTLIIQATDMEGNPTYGL
SNTATAVIRLLDVNDNAPEFTRDTFYGDVPENRVNVIVSNLTVTDKDKPGTPAWNAVYRI
TSGDPTGRFSIPTDPTTNEGLVTVVKPVDYEMNRSYLLTVVAENEVPLAGGIHRTRQSTA
TISIRIIDVNESPNFEPNXKQIKLDEGLPAGSMLTTFIAHDPDRHMQQSIRYSKLFDPAN
WLEIDPNNGRISTIALLDRESPYVRNNLYNATFMASDNGIPPASGTGTLQIYLLDINDNA
PRVFPQETEMCERPEPNGINITAVDGDLNPNAGPFAFELAHRPADIRRNWTLTRLNGDYV
QLSLRIGYLKSGIYEIPIIITDSGNLPMANTSHLRVKVCQCDHHGDCVDMERIMAAGLGT
GAIIAILICIIILLVLVLMFVMWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEED
QDYDLSQLQQPDTLEHDLVKPVGIRRLDERPLHPEPSYPLRSAAPHPGDIGDFIHEGLKA
ADTDPTAPPYDSLLVFDYEGSGSTAGSLSSLHSSSSGGEQDYDYLNEWGPRFRKLADMYG
GNDD
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgagaatttacagaaatcgcaccatgtgcaaaaagggatgcgcggtgctgacgctcgtc
gctgctttgcaggtggttttgcaggctgagggggccatgccatgccagccagccttcacc
cagcaagagtacagcatcatggtcaatgacatcattactgaaggacaggccctgcttaaa
gtaagcttcacagactgtggccgaagttccagtctgcactttgaaagcagttatccggag
gattttcggataggaaaagacggcacggtgtacgcctcaagaactcttcgcgtttccgaa
aagaagggatggagcctagagattagtgcaaaagataaggagacacaggaggtgtggcta
actcaagtcacctttacattaccggacacacctaaacagatgcctgagatcgtgtttcca
tggcgcagcattgttgttgggggtgacgggagcgtgagtcgcgtgaagagagactgggtc
attcctcccattaatgtccctgaaaactcccgaggacagttcccagaggagcttgtcaaa
atccgctcagacagagacaagattaacacactgcgctacagtgtgacaggaccaggagcc
gatcagactcctaccggcctcttcattatcgaccccatcacagggcagctgtctgtcact
aagcctctggaccgagaacagatctccaacttccatctgcgtgcccatgctgtggacatt
aacggcaatcagatggagaatcccattgatattgtcatcaatgttatcgacatgaacgac
aacagaccagagttttcccatcagatctggaatggcactgtggacgagggcgcaaagcca
ggcacgtttgtgatgactgtcacatctcaagataaggatgaccccaacacggccaatggc
atgctgagatacaagatcctctctcagagtcctgagactccctccaccaacatgttcacc
atcaataacaagacaggaaaaatcatcactgtagctgcaggactggatagagagaaagtg
tctcagtacactctgatcatccaggccactgatatggaaggaaatccgacatatggcctg
tccaacaccgcaactgctgtgatccgcctgcttgacgtcaatgacaacgcaccagagttc
accagagacacattctacggagacgtgcctgagaaccgtgtgaatgtgatcgtgtccaat
ctgacagtgacagataaagacaagccaggcacgccagcctggaacgcggtgtaccgcatc
acatccggagatccgacaggacgtttctcaattcccaccgaccccaccaccaacgagggc
ctggtcacggtggttaagcccgtagactatgagatgaaccgttcctatttgttaactgtg
gtagccgagaatgaagtgccgctggcgggagggatccaccgcactcgtcaatcgacagcc
accatttccatacgcatcatcgatgtaaatgagagtcccaactttgagcccaatnccaag
cagatcaaactggacgagggacttcctgcggggtcgatgctcaccacgtttatagctcac
gatcctgacagacacatgcagcagagtatcaggtactcgaaactgtttgacccagctaac
tggctggaaatcgaccctaataacggccgaatctccaccatcgccctacttgatcgtgaa
tccccgtacgtcaggaacaacctctacaacgctacctttatggcctctgataatggtatc
cctcctgccagcggaacaggcacgctgcagatctacctgttggatatcaacgataacgcg
ccacgtgtctttccccaagaaaccgagatgtgtgaaagaccagagcccaacggcatcaac
ataacagctgtggacggggacctgaaccccaacgctggaccatttgctttcgagcttgcc
caccgacctgctgacatccgccgcaactggacactcacccgcctcaatggcgactatgtc
cagttgagcctgagaatcgggtacctcaagagcggaatctatgagatccctattatcatc
accgactctggaaacctaccgatggccaacacctcacacctgcgtgtgaaggtgtgccag
tgcgatcaccacggagactgtgtggacatggagcgcatcatggctgccggtttgggtacc
ggagccatcattgccattctcatctgtatcatcatcctgctggtgctggtgctgatgttc
gtaatgtggatgaaaaggagagataaggagagacaggcgaagcagttgctgattgaccct
gaggacgacgtgcgagacaacatcctcaaatacgacgaggaaggcggcggggaggaggac
caggattatgatctgagtcagctgcagcagccagacactctggagcacgacctggtgaag
ccagttggaatccgtcggttggacgagcgcccgctgcacccggagcccagctacccactg
cgctctgctgccccgcaccccggagacattggagactttatccacgagggtctaaaggcg
gccgatacagaccccacggctcctccgtacgactctttgctggtgtttgattatgagggt
agcggctccactgccggctcactcagctcactgcattcatccagctccggaggcgagcag
gactacgactacctcaatgaatggggaccacggtttcgcaaactcgccgacatgtacggc
ggaaacgacgactaa
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