Silurus meridionalis (southern catfish): 124377234
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Entry
124377234 CDS
T08004
Symbol
zyg11
Name
(RefSeq) LOW QUALITY PROTEIN: protein zyg-11 homolog
KO
K10350
Zyg-11 protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124377234 (zyg11)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
124377234 (zyg11)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
LRR_4
ELMO_ARM
LRR_EndoS
DUF6477
CILP_8th
Motif
Other DBs
NCBI-GeneID:
124377234
NCBI-ProteinID:
XP_046692582
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All DBs
Position
23:complement(9872059..9883689)
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AA seq
739 aa
AA seq
DB search
MDEASPASLTDMCLSLVSSRLDRFCVKQGDGSLCLRDLVVFPQELADQLLCNMATEGLLN
DSTVGIFRNSRQLRLRRACIRTARISAEAFERALCLHRLLELDASHVNADLTITDILCCL
SASKAARESLQRLVLNGLSMSSLEESSGRCFSSLQGLRALSVSNVDFYDSGLVDVCSLPR
LESLDISNTSVTNLTPLLTCKDRLRYLTMHQLKRLEMSSKQLLAVISQLEGLQHLDISDD
KQFMSDIAWQLLKTPGILPALVSLDLSGRKQVADAAVRSFVDERPGMTFVGLLATNAGFS
EFLSGEGTLKVTGEANETQICEALRRYTEREGFVREALFHLFNLTYVMEKARPDILKLVA
LGMKNHPSTLNVQLAASACVFNLTKQDLANGMPVRLLGEVTQLLLEAMKXLPNHQQLQKN
CLLSLCSDRILQEVPFNRFEAAKLVMQWLCNHEDQNMQRMAVAIISILAAKLSTEQTAQL
GAELYIVKQLLHIVRQKTSQGTVDATLKFTLSALWNLTDESPTTCRHFIENQGLELFISV
LESFPSESSIQQKVLGLLNNIAEVGELHAELMVQSFLDHIRSLLHSPEVEVSYFAAGILA
HLTSRGETVWTLDLSLRTTLLEQLHSAILKWPTPECEMVAYRSFNPFFPLLECFQTPGVQ
LWAAWAMQHVCSKNAARYCSMLLEEGGLQHLEAVSSHPETHCDVRRLSESILDSLHRHRA
RTGYTRATQAHTHRERDVP
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggcatccccagcgtcactgaccgacatgtgcctgtcactggtgagctccaga
ctggatcggttctgcgtgaagcagggcgacggctcgctttgtctccgtgatcttgtggtc
ttccctcaggagttggctgaccagctgctctgcaatatggccacagaggggctgctgaac
gacagtacggtggggattttccgtaacagccggcagctccggttgcgtcgcgcctgcatc
cgtaccgctcgcatctcagcagaggcgttcgagcgcgccctgtgcctgcaccgcctgctg
gagctcgacgcctcgcatgtcaacgcagacctcaccatcactgatatcctgtgctgcctg
tcggctagcaaggccgcacgcgagagcctgcagcgcctcgtgctcaacggcctgagcatg
tcctcgctggaggagtcgagcggccgatgcttcagctcgttgcagggcctccgagcgctc
agtgtgtccaacgtggacttctatgactcagggctggttgatgtgtgctcactgccccgt
ctggaaagcctggacatctcgaacacatcagtaaccaacctgacccctctgctgacctgc
aaggacaggctgcgctacctcaccatgcaccagctcaaacggctggagatgagctcgaaa
caactactggccgtaatcagccagctggagggtctgcagcatttggacatctcggatgac
aagcagttcatgtcagatatagcctggcagcttctgaaaacaccgggcatcctgcctgct
ctggtgtctctggacctctcggggcgaaagcaggtggcagacgcggccgtccggtctttt
gtcgatgagcggccaggaatgacatttgttggcctgctcgctacgaacgccggcttctcc
gagtttctgtccggagagggaaccttaaaggtgaccggggaggccaatgagactcagatc
tgcgaggctctgaggcgctacactgagagggagggctttgtcagggaggcgctcttccat
cttttcaatctcacatacgtgatggagaaagcacgtcccgacattctcaaactggtagct
ttaggcatgaagaaccacccctctactctgaacgtgcagttggcagccagcgcttgtgtc
ttcaacctcaccaagcaggacctagcaaacgggatgcctgtacgtctcttaggtgaagtc
acacagctgctgcttgaggccatgaagnaccttcccaatcaccaacagttgcagaagaac
tgcctgctgtctctgtgtagtgaccgtattctgcaggaagttcccttcaataggtttgaa
gctgctaaactggtcatgcagtggctatgtaatcatgaagatcaaaatatgcagaggatg
gcagtggcaatcatatccatcttggctgctaagctgtctactgagcaaacagcacagttg
ggagcagagctatatatagtcaagcaactcctgcacattgtgcgccaaaagacgtctcag
ggcacagtggatgccacactaaagttcacactcagtgccctgtggaacttaacagacgag
tcacctactacctgcaggcattttattgaaaaccagggcttagagcttttcatcagcgtg
ctagagtctttcccttcagagtcttccattcagcagaaggttcttggtttactgaacaac
atagccgaagtgggcgagctgcatgcagagctgatggtacaaagctttctggatcacatc
aggtctctgttgcacagtcctgaagtggaagtcagctactttgcagcggggatcctggct
cacctcacttcacggggcgagacagtgtggactcttgacctgtccctcaggaccacactg
ctggagcagctgcactcagcaatcctaaaatggcccacgcctgaatgtgaaatggtggcc
tacagatcatttaaccctttcttccccttgctggagtgcttccagactcctggggttcag
ctgtgggcagcctgggccatgcagcatgtgtgcagcaagaatgctgcacgctactgtagc
atgctcttagaagaaggaggcctgcagcatctggaggcagtaagttcacatcctgagact
cactgcgacgtgagacgattgtccgagagcattctggacagccttcatcgccaccgagcg
cgtacaggctacacaagagctacgcaagcacacacacaccgagagagagacgttccatga
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