Silurus meridionalis (southern catfish): 124377235
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Entry
124377235 CDS
T08004
Symbol
atf6
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 alpha
KO
K09054
cyclic AMP-dependent transcription factor ATF-6 alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124377235 (atf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124377235 (atf6)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
124377235 (atf6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
Cep57_CLD_2
Rab11-FIP3
bZIP_Maf
Motif
Other DBs
NCBI-GeneID:
124377235
NCBI-ProteinID:
XP_046692583
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All DBs
Position
23:6729281..6768610
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AA seq
652 aa
AA seq
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MSKQLLLNVEDPPSFRTVTAMSNDTANMSIDQDGEWDISLFDELDDLGDAEALLQALENA
GYLENAADLNLDVDLPVWSAGVWGDTSSTDGDVSADMLSPAHTLSSVSSPTSTEAHSPYS
LLDEALSPLSSHSQPSPLSVCSDSSSSTEPPAEKKPVKKSNQIKAKPVLRPIHLSPKVSI
QPKPLITTLPFAQPAASLHTKTIIIQPVQTTIMPVVKPAPVTIQPAPPAGGHPNMLSQPT
QVLQLQPPQVVPAGARVLTMPSLAQERPTIPAPSAATTPVVGIPLRNPSSDDDSNVSRRQ
QRMIKNRESASLSRKKKKEYLLTLEARLKVALSENEQLKSENGTLKRQLEGLLNENTILK
ATAPKRRAVCLMVVLVFLAINVVPLSIFKGDTDSKFAPSSGPISRHLLSFSSKIDTDSSQ
KLEDMESMPEEKALMVVKRDPLFLRTPPVAPPCQPSVNRTKCLRMASELRGWVHRHEAER
TKNQRNSSTHSRARTITKTGNKKAEVAQIVTVQYTDSPEKLSSNELQVYYAPHRTYSHFF
DELNRRGDTFYVISFRRDHLLLPATNHNRGSRPKMSVVLPAMNINESVIKDKEFEVMMQI
DCEVMDTRILHIKSSSIPPILRVNETDADSFYHSAPSNSHASPPVGVLMGSA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacagttgttgttgaacgtcgaggatccgccgagtttccgaactgttacagcg
atgagtaacgacacagcgaacatgtccatcgatcaggacggagagtgggatatcagtttg
tttgacgaattggacgacttgggagacgctgaagcattgctgcaggctctcgagaatgct
ggctatttggaaaatgctgctgacctgaacctggacgtggatctgcctgtgtggagcgca
ggtgtgtggggagacaccagcagtacagatggagacgtttcagcagacatgctctctcca
gcccacacactcagttccgtctcttcacccacgtcaacagaggcccattcaccctactct
ctactggatgaagctctgtctccactctcctcccactctcagccttctccactctctgtc
tgctccgattccagcagctcgaccgaaccacccgctgagaagaagccagtcaagaaaagc
aaccaaataaaagctaaacctgtcctgaggcccattcatctgagccctaaagtctccatt
cagcctaaaccactgatcacaacactgccctttgctcagcctgcagcttctcttcacacc
aaaaccatcatcatccagccggtacagactaccatcatgccagtggtcaaacctgcaccc
gtcaccatccagccggcaccccctgcaggaggtcatcccaacatgctctctcagcccacc
caggttctgcagctgcagcctccgcaggttgttcctgcaggtgcccgggtgctcaccatg
cccagcctggcacaggaaaggcctacaatccccgccccctctgccgccaccacgcctgtt
gtcggcattccgctccggaacccttcatcagacgatgattccaacgtgtcacgacggcag
cagcggatgatcaagaacagagagtctgcatctttatcacggaagaagaagaaggagtac
ttgctgaccttggaggcccgtctgaaggttgcgctgtccgagaacgagcagctgaaaagt
gaaaacgggacgttaaaacggcaactggagggtcttttaaatgaaaacaccattctgaag
gcaactgcaccaaagagacgagccgtgtgtctcatggtggtcctggttttcttggccatc
aacgtcgtgccattgagcatttttaagggggatacagactccaaatttgcaccatcttct
ggtcccattagcagacatctgctaagcttctcgtcaaagatcgacacagattcttctcaa
aaactggaggacatggaatcgatgccagaggagaaagctctcatggtggttaaaagagat
cctctcttcctcagaactcctcctgttgctcctccctgccagccttcagtcaacaggacc
aagtgtctaaggatggccagtgagctgagggggtgggtccaccggcacgaggcagaacgc
actaagaaccagcgtaacagcagcacccactccagagctcgaaccatcacgaaaacgggc
aacaagaaggctgaagtggcgcagatcgtgacggtgcagtacacggactctcctgaaaag
ctttcaagcaacgagctgcaggtttactacgccccgcaccgcacctacagccatttcttt
gatgagctcaaccgaagaggagacaccttctatgtgatttctttccgcagagatcacctc
ctccttcctgccaccaaccacaacagaggaagcagaccaaagatgtcagtggtgcttcca
gcgatgaatataaatgaaagtgtgattaaagacaaagagtttgaggtgatgatgcagatc
gactgtgaggtcatggacaccaggatccttcacatcaagtcctccagtatcccacccatc
ctgcgggtcaacgaaaccgatgctgattcgttctaccactctgccccttctaacagtcat
gcttcaccacctgttggcgttctcatgggctctgcttga
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