Silurus meridionalis (southern catfish): 124377296
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Entry
124377296 CDS
T08004
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03410
Base excision repair
smeo04210
Apoptosis
smeo04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124377296 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
124377296 (parp1)
04217 Necroptosis
124377296 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smeo03032
]
124377296 (parp1)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124377296 (parp1)
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124377296 (parp1)
Enzymes [BR:
smeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
124377296 (parp1)
DNA replication proteins [BR:
smeo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
124377296 (parp1)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
124377296 (parp1)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
124377296 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
124377296
NCBI-ProteinID:
XP_046692668
LinkDB
All DBs
Position
23:22542523..22567425
Genome browser
AA seq
1020 aa
AA seq
DB search
MADSQDDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAAQSTSDISGFTDLRWEDQEKVKKAIESGGSVGGKAGRKGAGKGEKSLNEFAVEYAKS
NRSTCKGCDQKIEKDQIRISKKAVDPEKPQLGLIDRWYHTACFVNRREELVFKPEYSAPQ
LKGFAALRAEDQEDLKKRLPTVKNEGKRKADTVDGDALSKKQKKEEEEEKKKLEMKLKEQ
TQLIWGIKDKLKKFCSTNDMKELLIANSQEVPAGESNILDRLSDCMAFGSLKPCETCQGQ
LVFKSDAYYCTGDISAWTKCVFKTLTPNRKDWVTPKEFHEIPFLKKFKFKRQDRVFPKES
PAAAPSASSTAASASSSMASSTSSFPTELPTEVPSDKPLTGLKVLAVGKLSKNKDELKTV
VEELGGKITGTVSKATFCLSSTKEVEKMSKKMEEVRDAGVRVVSEDFLTDIKSSGKALRE
LISLHGISPWGADVKLEAQASSTASKSTGAAKSQGKSKEDEGGSKSKKMKLTVKGGAAVD
PDSGLENCAHVLDQNGKIYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGT
TIGGNKLDKFYDKNSAMDNFRSVYEEKTGNCWTSSSFTKHPNKFYPLEIDYGQDEEAVRK
LTASSGTKSKLAKPIQELIRAIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLT
DVQQAVSDEASEARILDLSNRFYTLIPHDFGMKKPPLLSNLDYIQAKVQMLDNLLDIEVA
YSLLRGGAEDDKKDPIDINYEKLKTKIEVVDKSSEEAQIIQQYVKNTHAATHNTYTLEVE
EVFKIAREGEYQRYRPFKDLPNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKG
IYFADMVSKSANYCHTSQADPVGLILLGEVALGNIHELKKASHITKLPKGKHSVKGLGRT
APDPSATTTLNGVEVPLGKGINTNIDDTSLLYNEYIVYDVAQVNLKYLLKVRFNYQMSLW
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcccaggacgacaagctttacaaggccgagtacgcgaaaagtggacgcgct
tcgtgcaagaaatgcaaagagaacatcgcgaaggactcgctgaggatggccatcatggtg
cagtcgcccatgtttgatgggaaagtgccgcactggcatcatttctcctgcttctggctg
cgtgcagccgcgcagtcgacgtccgacatctctggctttaccgatctccgctgggaggac
caggagaaagtgaagaaggctattgaaagtggagggtctgttggaggtaaagccggccga
aaaggagcaggtaaaggagagaagtcgctgaacgagtttgcggtggagtacgcaaaatcc
aaccggagcacatgcaaaggctgcgatcagaaaatcgaaaaggaccagatccgtatttcg
aagaaagctgtagacccagaaaagcctcagctgggcctaatcgaccgctggtaccacacg
gcctgctttgtgaaccgacgtgaggagctggtgtttaaacccgagtacagcgcccctcag
ctaaaaggctttgccgctttgcgtgctgaagaccaggaagatctaaagaagagactcccg
actgtcaagaacgaagggaaaaggaaagcggacaccgtcgatggagacgcgctgtctaag
aagcagaagaaagaggaggaagaggagaaaaaaaagctggagatgaagctgaaggagcag
acccagctgatttgggggattaaggacaagctgaagaaattctgttccaccaatgacatg
aaggagcttctgattgctaacagccaggaagttcctgcaggagaatccaacatcttggac
cgtctgtcggactgcatggctttcggctcgctgaagccctgcgagacgtgtcagggacag
ctggtgttcaagagcgacgcttattactgcacaggagacatctcggcctggacgaagtgc
gtgttcaagactctgacgcctaaccgtaaagactgggtgactccgaaggagtttcatgaa
atccccttcctgaagaagttcaagtttaagcgccaggaccgcgttttccccaaagagtct
cctgctgctgctccttctgcatcatccacggctgcttcggcttcttcctccatggcttcc
agcacctccagctttcccactgaactccctacagaggtgccctcagataagcctctgacc
gggctgaaggttctggcagtggggaagctgagcaagaacaaggacgagctgaagactgtg
gtggaggagctcggaggaaagatcaccggaactgttagtaaagccacattctgcctcagc
tccacgaaggaagttgaaaagatgagtaagaagatggaggaggtgagggacgccggcgtt
cgcgtcgtctccgaagacttcctcaccgatatcaagtcctcgggcaaggcgctccgagag
ctcatctccctgcacggtatctccccctggggtgccgatgtgaaactcgaggcccaggca
tcatcaacggcttcgaaatccaccggagccgccaagagccaggggaaaagcaaagaggac
gagggtggcagtaaatcgaagaagatgaagttaacagttaaaggcggagcagcagttgat
ccagattcaggtctagagaactgcgctcacgtgctggatcagaacggaaagatctacagc
gctactctcgggctggtggacatcgtccggggaacaaactcatactacaaactccagctt
ctggaggatgatgtacagaaacgatactgggtgttcaggtcctggggtcgagtcggaaca
acaattggcggaaacaaactagataagttttatgacaagaactctgccatggataacttc
cgcagcgtatatgaggaaaaaacaggcaactgctggacctcgagcagtttcaccaaacat
cccaacaagttttatcctctggagatcgattacggacaggatgaggaagcagtgaggaag
ctgacagccagcagcggcaccaagtctaaactcgccaaaccaatacaagagctcatccgc
gcgatcttcgatgtggagagcatgaagaaggccatggtggagttcgagattgacctgcag
aagatgcctttggggaaactaagtaagagacagattcagagtgcgtactctctcctcaca
gatgttcagcaggccgtctccgatgaagcttcagaggctcggattctggatctgtccaat
cgattctacactctgatcccacacgactttggcatgaagaaaccaccactgctgagtaac
ctggactacattcaggccaaagtgcagatgctggacaacctgctggacatcgaggtggcg
tacagtcttctgcgcggcggagccgaggacgacaagaaagatccgattgacatcaactac
gagaaactcaaaaccaagattgaggtggtagataaatcttcagaagaagctcaaatcatt
cagcaatacgtgaagaacacccatgccgccacccacaacacctacacactcgaagtcgag
gaggtctttaagatcgccagagagggcgagtaccagcgttaccgccccttcaaagattta
cccaaccgccagctcctgtggcacggctcacgcaccaccaactacgccggcatcctgtct
cagggtctgcgcatcgccccgcctgaggctcctgtgactggttatatgttcggtaaaggt
atatactttgctgacatggtgtccaagagtgcaaactactgccacacgtcccaagcggat
cccgtaggcctcattctgttaggagaagtcgctctcggtaacattcatgaacttaaaaag
gcttcccacatcacaaaactaccgaaagggaaacacagtgtgaagggtctgggaaggacc
gcccccgatcccagtgccaccacgactcttaacggcgtggaggtgccgttgggtaaaggg
atcaacacgaacatcgacgataccagtctgctctacaacgagtatattgtgtacgacgtt
gctcaggtgaacctgaaatacctcctgaaagtccgcttcaattatcaaatgtccctctgg
tga
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