Silurus meridionalis (southern catfish): 124377426
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Entry
124377426 CDS
T08004
Symbol
sox11b
Name
(RefSeq) transcription factor SOX-11b
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124377426 (sox11b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124377426 (sox11b)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
TFB6
Hydin_ADK
RXT2_N
NOA36
DNA_pol_phi
Nop14
CDC45
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
124377426
NCBI-ProteinID:
XP_046692861
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All DBs
Position
23:complement(16222258..16224679)
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AA seq
388 aa
AA seq
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MMVQHSETESGASREATDTEEAEMSVCSPVPPKPDWCRTASGHIKRPMNAFMVWSKIERR
KIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLQHMADYPDYKYRPKKKPK
LDNSSKPGALSPEKNGNKAVKAAPKKCTKVKPSKPGNVGAGARAAQDVRCNYAFTHLKVS
KSVKRELTDDEDDDDDEDDDDDDDEDDYDDESPVRFKVEDDEEHLRPYGVAKVPASPTLS
SATESEGASMYEESSGRASATANSRMFYSFKNITKQQQQQPHHHHASRPSTLSPAPSFRS
ASISSSSCGEDADDLLVDFSLNLAAGGEPNNHTSGNLCLSLVDKDLDSFSEGSLGSHFEF
PDYCTPELSEMIAGDWLEANFSDLVFTY
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgatggtacagcacagcgagacagagagcggcgcgtcccgcgaggccaccgacacggag
gaagccgaaatgagcgtctgcagcccagtgccgccaaaaccagactggtgccggacagcc
agcggccacatcaagcggccaatgaacgcgttcatggtgtggtctaagatcgagcggagg
aagatcatggagcagtccccggacatgcacaacgccgagatctccaaaagactcggcaag
cgctggaaaatgctgaaggacagcgagaagatcccgttcatccgggaagcggagcggcta
cgcctgcagcacatggctgactacccagactacaaatacagaccgaagaagaagccaaag
ctggacaattcttccaaaccgggcgcgctgtctccggagaaaaacggcaacaaggctgtc
aaagcagcgccaaagaagtgcacgaaggtgaagcccagcaagccggggaacgtcggagcc
ggcgccagagccgcgcaagacgtccggtgcaactacgcgttcacgcacttgaaagtaagc
aagtcggtcaagagggaactgacggacgacgaagacgacgacgatgatgaggacgacgac
gacgacgatgatgaggacgactacgacgacgagtcccccgtgcgctttaaagtcgaggac
gacgaggagcacctgaggccgtacggcgtggccaaagtgccggcgagtcccacgctgagc
tcggccacggagtcggagggcgcgagcatgtacgaggagtcgtccgggcgcgcgagcgca
acagccaattccagaatgttttacagcttcaagaacatcacgaagcagcagcagcagcag
cctcaccatcaccacgccagcagaccttccacgctctcaccggctccgtctttccgctcc
gcgtccatctcgtcgtcatcgtgcggtgaggacgcggacgacctgctggtcgacttcagt
ttgaacttggcggcaggcggagagccgaacaaccacacttcagggaacttgtgcctgtct
ctggtggataaggacttggactcgttcagtgaaggcagcctcggctctcacttcgagttc
ccggactactgcacaccggagctgagcgagatgatcgcaggggactggcttgaggccaac
ttctccgacttggtgttcacctactaa
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