Silurus meridionalis (southern catfish): 124377446
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Entry
124377446 CDS
T08004
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124377446 (hps1)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
124377446 (hps1)
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GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
124377446
NCBI-ProteinID:
XP_046692890
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Position
2:18177811..18187082
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AA seq
673 aa
AA seq
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MKCLLIATESAEVLFYWTDQEFEQNIKKQYGTPQEESGRPPAFADSINTLFAPIIISCST
MVDRLGDGYTSFSTENGHIYALHQFEECLYIAVNGDGEESDEDLKRKIFVMKKFTEILFG
MVTLSSTLLRKELRPSDTEQRNRVWKKLQSLLETYSRLREQDQSFLVEAVERLIHPTLCE
QCIEFLERKLVLQMNNSTERGGEEVLHAFILVHTKLLAFYSSRNASTLSSSDLLALIIIV
QDLYPSNLEVDETPSEDVDNISAPEVFYTPEPSPNERDSGHLSSDSAPVFQFVDPDIQMA
EDSLKTLQLHVPDPMTPTRVFLEATFKEGFFPMMPHSMYCLPLWPGITLVLLTKIPNSQV
AMSVYVLLEAFAKLEKRLSEGLEGTVALRSQSPIQELRTKVDKFIRMLASMEILTLQLQN
TWSEFKNKAFTRSGPGITKALVPSCRSIRTQLCSVYQQCFAAACMGRNQCLATILQEKAL
NMVQEKLIDWKDFLLVKSKRNITMVSYLEEFPGLVHFIYVDRTSGQMIAPSLSVTEGSAS
ELGIGPIAHFLKNKLWSLVATTRHYLQKGYTTVTLRDGDFYFCYFLWFENETGYKLEVVD
IPKLPDDSPPIGMLAWDYYRKLLRYYSKSHQNELVKCYELLTVHLGVVPTEYILQHCSQL
ARKLWEPSRIPLL
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgccttctgattgccaccgaaagtgctgaggtccttttctactggactgaccaa
gagtttgagcagaatataaagaagcagtatgggacaccacaagaggagagtggaagacct
ccagcctttgcggatagcatcaacacattgtttgctccaatcatcatctcgtgtagcact
atggttgaccgtctgggtgacggctacacttctttcagtacagaaaacggtcatatctat
gcactacatcagtttgaagaatgtctgtatattgctgtaaatggagatggtgaggagtct
gatgaggatctaaagaggaagatctttgtaatgaagaagtttacagagatcctgtttggc
atggtgacactcagcagcacccttttaaggaaagaattgcggccctcagacacagagcag
agaaaccgtgtatggaagaagctgcagagtctccttgaaacgtacagccgtttacgagaa
caggaccaaagttttctcgttgaggcggttgagagattgatccaccccacactttgtgag
cagtgcattgagtttttggagcggaaactggttctgcaaatgaacaacagcactgaaaga
gggggggaggaggtgctgcatgccttcatcctggtgcataccaagttattagctttctac
tcgagtcgtaatgccagcactcttagctcttctgacctgctggcattgatcattattgtg
caggacctttatcccagcaaccttgaggttgatgaaactccttctgaggatgtggacaat
atttcagcacctgaagttttctatactccggagccttcacccaacgaacgagactcaggt
catctgagtagtgacagtgctcctgttttccagtttgtagatcctgatattcagatggct
gaagacagtctaaagactcttcagctacacgtccctgatcctatgactccaacaagagta
tttcttgaagcaacatttaaggaaggcttctttcccatgatgcctcactccatgtactgt
ttacctctttggcctggcattactttagtgctgctgaccaagattcctaacagccaggtg
gccatgtctgtctatgtgttactggaagcttttgctaagctggagaagaggctgagtgaa
gggttggaggggacagtggccttacgcagtcaatccccaattcaggaactccgcaccaaa
gtcgacaagtttatcagaatgctggccagcatggaaatcctgaccctgcaactacagaac
acctggtcagagttcaagaacaaggcttttacccggtcaggacccggcatcacaaaagcg
ctggttccttcatgccgtagcattaggactcagctgtgcagtgtgtaccagcagtgtttt
gcagctgcatgtatgggcagaaatcagtgtcttgccactatacttcaagaaaaggcgctg
aacatggtgcaagaaaagctgatagactggaaggactttcttttggtgaaaagcaagaga
aatataaccatggtgtcatacctggaggaattccctggtcttgtgcatttcatttacgtg
gatcgcacttcaggacaaatgatcgcgccgtctctcagtgtgaccgagggctctgcttca
gagctgggaataggccccatagctcactttcttaaaaacaagctgtggagtcttgtggca
acaacaaggcattatttgcagaaaggctacaccactgtgactctacgagatggggacttc
tacttctgctacttcctctggtttgagaatgaaacaggttacaagctagaggtggtggat
attcctaagcttcctgatgactcgcctccgataggaatgcttgcctgggattactacagg
aagctgctgcgctactacagtaagagtcaccagaatgagctggtaaagtgttatgagctg
ctgaccgtgcacctcggcgttgtccccactgagtatatcctgcagcattgcagccagctg
gcccgtaagctctgggagccatcgcggattccgctcttatga
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