Silurus meridionalis (southern catfish): 124377475
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Entry
124377475 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: crooked neck-like protein 1
KO
K12869
crooked neck
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124377475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124377475
03036 Chromosome and associated proteins [BR:
smeo03036
]
124377475
Spliceosome [BR:
smeo03041
]
Complex B
Other components
Prp19-related factors
124377475
Complex C
124377475
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
124377475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_CcmH_CycH
TPR_19
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
124377475
NCBI-ProteinID:
XP_046692934
LinkDB
All DBs
Position
23:complement(19141316..19148602)
Genome browser
AA seq
723 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLRKRKGFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNVTLWLKY
AEMEMKNRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNVAGCRLVFERWMEWMPE
EQAWHSYINFELRYKEVEKARCIYEKFVTVHPEVKNWIKYARFEDKHGYIAHARKVYERA
IEFFGEEQVDENLYVAFAKFEEKQKEFERVRVIYKYALDQIPKQQAQELFKNYTVFEKKF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLLESDADADTVRDVYERAIANVP
PITEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYGKF
EIRQKNLQNARRGLGTGIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLSXRPENCTT
WIKFAELETILETXERALAIYELAISQPRLDMPEVLWKSYIDFEIEQEEYENTRGLYKRL
LQRTQHVKVWKSYAQFELSMEGEERLQRCRQVYEEANRGLRTCEEKEERLMLLEAWMNFE
QEFGTSADKDRVKKLMPKQVKKRRKLTAEDGTDAGWEEYYDYIFPEDAANQPNLKLLSMA
KMWKKQQQQEQEKQEAEEDEPTEPTQPRDEQEESRETQEPIESVPDDQDDSDSSSESESE
TKN
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccgcggcggggaaacagagaataccgaaagtggcgaaggtaaagaataaa
gccccggctgaggtgcagatcacagctgagcagctgctacgtgaagccaaggaacgagaa
cttgagcttcttccccctccaccgaaacagaagatcactgatgaggaggagttaaatgat
tacaaattacgaaaacgcaagggatttgaagacaatatcaggaagaaccggactgtcatc
agcaactggatcaagtacgcacaatgggaggagagtctgaaggaagtacagagagctcgg
tctatctacgagcgagcgttagacgtggatcatcggaatgtcacgctgtggctaaaatat
gccgagatggaaatgaagaaccgtcaggtcaatcacgctcgaaacatctgggacagagcc
ataaccatcctgccccgagtcaaccagttctggtacaaatacacttacatggaggagatg
ctggggaatgtagcaggctgcaggctggtgtttgagcgctggatggagtggatgccagag
gagcaggcctggcactcgtacattaactttgagctgcgctataaggaggtggagaaagcc
cgctgcatttatgaaaaatttgtgacagtccaccctgaagtgaagaactggatcaaatac
gctcgcttcgaggataaacatggttatattgctcatgcgagaaaagtgtacgagagagcc
atcgaattctttggtgaggagcaggtcgatgaaaacctgtacgttgcttttgctaaattc
gaggagaaacaaaaagagttcgagcgtgtacgggtgatttataagtacgcactggatcaa
atccccaaacagcaggcccaggagcttttcaagaactacacagtgtttgagaagaagttt
ggagaccggagaggaatcgaggacgtcatcgtcagcaaaaggagatttcagtacgaggag
gaggttaaggcaaatccgcacaattacgacgcctggtttgattacctgcgtctgttagag
agcgacgccgacgcggacacggtccgagatgtgtacgaacgagccatcgccaacgttccc
cccattactgaaaagagacactggaggcgttacatttacttgtggatcaattacgctctc
tatgaggagctggaagtcaaggaccctgaaagaacaaggcaggtgtatcaggcatgtctg
gatctcattccacacaaaaagttcaccttcgctaaaatctggctgttgtacggcaagttt
gaaattcgccagaagaacctgcagaacgccagacgaggcctgggcacaggcattgggaaa
tgtccaaaaaacaagttgttcaagggatacatcgagctggagctgcagctcagagagttt
gaccgctgcaggaagctgtatgagaagtacctgagtnnacgcccagagaactgcaccacc
tggatcaagtttgcagagctcgagacaatccttgagacgnnagaaagggcgctggccata
tatgagctggccatcagtcagcctcgtctcgacatgccagaggtgctctggaagtcatat
attgattttgaaatcgagcaggaggagtatgagaacacgcgtggtctttataagaggctc
ttacagcgcacacagcatgtcaaggtatggaaaagttatgcacagtttgagctgtcgatg
gaaggtgaggagcgactgcagcggtgcaggcaggtatatgaggaagcaaaccgaggcctg
cgaacgtgtgaggaaaaggaggagagactcatgttgcttgaagcctggatgaattttgag
caggagttcggcacctcggccgacaaggacagagtgaagaagctcatgcccaagcaggtg
aagaagaggaggaagcttacggcagaggacgggacggacgctggatgggaagaatattac
gactacatcttcccggaggacgctgccaatcaaccaaacctcaagctgctgtccatggcc
aaaatgtggaagaagcagcaacagcaggaacaggagaaacaagaggcagaagaggatgaa
cctactgaacccacacagccaagagacgagcaggaggaaagcagagaaacacaggagcct
atagagagtgtgcctgatgatcaggacgacagtgacagcagcagtgagagtgaaagtgaa
actaaaaactaa
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