Silurus meridionalis (southern catfish): 124377584
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Entry
124377584 CDS
T08004
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124377584 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124377584 (gbf1)
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
124377584 (gbf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
Motif
Other DBs
NCBI-GeneID:
124377584
NCBI-ProteinID:
XP_046692957
LinkDB
All DBs
Position
2:complement(19019708..19075545)
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AA seq
1871 aa
AA seq
DB search
MVDKNIYIIQGEIATVVGAIKRNSRWSTHTPLDEEQDPLLSSFSQLKETLNIVKDLSEVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEGAAEGIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSFVGTNMKKAYNILWKNKRVQLKMRAGGMSESSKWK
KQKRSPRPSHHMVRSPSGQMDQAQLSALSNNLSGGVPFIEQQDDGSTILPVSDSVASSLS
SPTADSGLSNWSKATSKEDLTDLESCSTATTPSTAASTDACMLDTQSEGRPVERTQSASV
ESIPEVLEDRDSLMDQSDSASVHDMDYVNPRGVRFTQSSQKEGVALIPYGLPCLRELFRF
LISLTNPHDRHNSDVMKHMGLQLLNVALEATHIAPYQSLLVLVKDELCRHLIQLISEERM
NLYAASIRVCFLLFESMRGHLKFQLEIYLKKLMDIITSENPKMPYEMKEMALEAVVQLWR
IPSFVTELYINYDCDFYCSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEA
HCQAKVMTRAAEQEHSETLTAEAEAPVYNTTDAATEAGKTLFGLNGQTALESGAPSVCPP
TSGHLMAQKMKLGRQDQEETDSAEKKSPKKPHRFTSCFPDSQELINIKNKKKLLITGTEQ
FNQKPKKGIQFLQEKGLLSSPMDTGEVAQWLRENPRLDKKMIGEFISDRNNTELLDSFVN
TFAFQGLRIDEALRLYLEAFRLPGEAPVIHRLLETFTDNWHKVNGNPFLTNDAGFALAYA
VIMLNTDQHNHNVRKQNIPMTVEQFKKNLKNVNGGTDFDQDMLEDIYNAIKNEEIVMPDE
QKGLVKENYVWSVLLHRGATSEGIFLHVPPGSYDHDLFTMTWGPTIAALSYVFDKSLEDA
IIQKAIAGFRKCAMISAHYGFSDVFDNLIISLCKFTTLNSESVENLPTVFGSNAKAQIAA
KTAFNLAHRHGDILREGWKNIMDAMLQLFRAELLPKSMVEVEDFVDPNGMISLQRVETPS
NRGESAVLSFVNWLTLSGGAEQSGQRGPSAENQEAKQAALLCIKHCDPEKLITESKFLQL
ESLQELMKALISVTPDEETYDEEDAAFCLEMLLRIVLENRDRVSCVWQTVRARLYHLCVH
ANESCFLVERAVVGLLRLAIRLLRREDISSQVLLSLRLLLMMKPHVLSRVSREIAYGLHE
LLKTNAANIHCTDDWYTLFTLLECIGAGVKPPAALQVTSSSPDSDTGAQSDSEVSSYHQS
EVTLDRGYTSDSEVYTEHSKPRMLRSSTEVEVGWLVVGKDDLDSSKALLAPDSKIQAPLI
NQYSLTLGQDMGLHDTKSLIKCVESLSFIVRDAAHVTPENFELCVKAIRVFVEASLNGGY
RTHEKKKSHKYDSKASRLRKKPREKEGVSRRAKPTSQRPSRSHSDDEEDEGVPASYHTVS
LQVSQDLLDLMHTLHTRAASIYSSWAEEQRHLEAGGKKIEADSQTLWSSCWCPLLQGMAW
LCCDARRQVRMQALTYLQRALLVHDLQTLDAVEWESCFNKVLFPLLTKLLDNISPADVGG
MEETRMRACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAGSSDLLLEAIPESL
KNMLLVMDTAGIFHNADSRTGYSDLWEITWERIDCFLPHLREELFKQAVMPEPVPSVPVE
PAPASVPISSPSPPVPFPAPVPTASPEPKTPSRPASPQDIQTPSANGNDRSSPVPPSTPP
MPTPVKSSSDTMPTLTQSPLILQPLASPLQVGVPPMTLPIILNPALIEATSPVPLLSVPR
PTEPIDTSEVK
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagaatatatacatcatccagggggagattgcaacagtggttggtgccatc
aagagaaactccagatggagtacacatacaccactggacgaagagcaggatcccctcctc
agcagtttcagtcaacttaaggagacgctgaacattgttaaagacctctccgaagtggag
cccaatgtctttcttcgacccttcttggaagttgttcgctcggaggacacaaccggacca
atcacaggcctcgctctcacttccgtcaacaagtttctctcttacggcctcatagatgcc
aatcatgaaggagcagcagaggggattgagaacatggctgatgcggtcactcatgcaaga
ttcgtggggacagaccctgctagtgatgaagtggtgctcatgaaaatcctccaggttttg
aggactttgctgctgactccagtgggagcccatctgacaaacgagtctgtgtgtgagatc
atgcagtcctgcttccgcatttgctttgagatgagactaagtgagctgctgaggaaatca
gccgaacacacgctggtggacatggtgcagctgctcttctccagattaccacagtttaaa
gaggaggctaaaagttttgtgggcacaaacatgaagaaggcttacaatatcttatggaaa
aacaaacgagtgcagctgaagatgcgcgctggtggaatgtccgaatcgtccaagtggaag
aaacaaaagcggtctcctcgtccctcgcatcacatggtgcgcagcccctcaggacagatg
gaccaggcccagctcagcgctctcagcaacaacctctcaggtggagtgccgtttattgag
caacaagatgatggatctaccatactgcccgtttcagacagtgtagcttcctccctctct
agccctactgcagacagtggactttccaactggtctaaagccacatctaaagaagacctc
acagacctggagagctgctccacagccactactccaagcacagcagcttctactgacgct
tgtatgctcgacactcagagtgagggtagaccggtagaacgtactcagtctgcctcagtt
gaatccattcctgaggtgcttgaggaccgagattcattaatggatcagtctgactctgca
tcagtgcatgacatggactatgtaaatcccagaggagtgcgcttcactcagtcttcccag
aaagagggtgtagctttaatcccatatggacttccatgtctgagagagctcttccgcttt
ctcatttctctcaccaaccctcacgaccgccacaactcggatgtgatgaagcacatgggt
ttgcagctgctcaacgtggctctggaggccacacacatcgctccataccagtcacttctg
gtcctagtcaaagatgaactctgcagacatctcatacagttaataagcgaagagcgaatg
aatttgtatgctgcctcaatccgagtctgcttcctcctgtttgagagcatgcgtggacat
ctcaaatttcagctcgagatttatttgaagaagctaatggacatcattacctcagagaac
ccaaagatgccctatgaaatgaaggaaatggcccttgaggcagttgtgcagctgtggaga
atccctagcttcgtgactgagctttatattaactatgactgtgatttctactgttccaac
ctttttgaggacctcaccaaactgctctccaagaatgcttttccagtctctggacagctc
tacacaacccatcttctttcacttgaagctctgttaactgtaatagacagcacagaggct
cactgtcaggccaaagtgatgaccagagctgctgagcaggagcactcagaaactttaaca
gctgaagcagaggcccctgtctacaatactacagatgcagcaacagaggctggcaagact
ttgtttggtttaaatggacagactgcgttagagtcaggagctccatcagtgtgtcctcca
accagtggacatctaatggctcagaagatgaagctgggtagacaagaccaggaagagact
gattcagctgaaaagaaaagccctaaaaagcctcaccgtttcacaagttgtttcccggac
tcccaggaactgattaacatcaaaaacaagaaaaagcttctcatcacaggaacagagcag
ttcaatcaaaagcctaagaaggggatccagtttctgcaggaaaaaggtctcctgagtagc
ccaatggacaccggtgaagtggctcagtggcttagagaaaaccctcgactggacaagaag
atgattggagaattcataagtgacaggaacaacacggagttgctcgacagttttgtcaac
acattcgcttttcaagggctgcgtatagacgaggctctgcgtttgtatctggaggctttc
cgacttcctggcgaagcgccggtcattcatcggctcttggagaccttcactgacaactgg
cataaagtaaacgggaatcccttcttgacgaacgatgctggttttgcattggcctacgcg
gtcattatgttaaacacggatcaacacaaccacaacgtccgcaagcagaacatccccatg
accgtagagcaattcaagaagaatttgaaaaatgtgaatggtggtacagattttgatcag
gacatgctggaggatatctacaatgccatcaagaatgaagaaattgttatgcctgatgaa
cagaaaggcctggtaaaggagaactatgtgtggagtgtgttgctacacagaggagccaca
tctgaggggatcttcctccatgtgcctcccggcagctacgatcacgacctattcacgatg
acctggggcccgacaattgctgccctttcctatgtgttcgacaagagcttagaggacgct
attatccaaaaagccattgcgggcttcaggaaatgcgcaatgatctcagcacactatggc
ttcagcgacgtttttgataatttaatcatctctctttgcaagtttactacgctcaacagt
gagtctgtagaaaacctgcccacagtttttggcagcaatgccaaggctcagatagcagca
aagacagcgtttaacctcgctcatcggcacggtgatatcttgcgagagggttggaagaac
atcatggatgctatgctacagctcttcagggctgagctcttacccaagtccatggtagag
gttgaggattttgtagacccgaatggaatgatctctctacagcgtgtggagacgccatca
aacaggggagagtccgctgtgttgagctttgttaattggttgacactgagtggtggagcg
gagcagtcaggacaacgaggcccctctgccgagaatcaggaggccaagcaggctgccctg
ctctgtataaagcattgtgatcctgagaaactgatcacagaaagcaagttcctgcagctg
gaatctctgcaagagctaatgaaggctcttatctcagtgactcctgatgaagagacgtat
gatgaagaagatgctgctttctgtctagagatgcttcttcgcatagttctagaaaatagg
gaccgggtatcgtgtgtgtggcagactgtacgtgcccgtttgtatcacctgtgtgtgcat
gccaacgagagctgcttcctggtagaaagggctgtagtggggctgctgagacttgctata
cgattgctgcgacgggaggatatcagctcacaggtattgctttccttgcggctgctcctg
atgatgaagcctcatgtgttgtccagagttagtcgagagattgcctatggcctgcacgag
ctgctcaaaaccaatgctgccaatatccactgcaccgatgactggtacaccctttttacg
ctgctggagtgcatcggtgccggagtcaaacctccagccgcactgcaggtcaccagcagc
agccctgacagtgacacaggtgctcagtctgacagtgaagtgagctcataccaccagagt
gaagtcactttggaccgaggctatacctctgactccgaggtttacaccgaacacagcaaa
cccagaatgctccgctcctccactgaagttgaagtcggatggctagtggttggtaaggat
gacctggacagcagtaaggccctacttgctccagactctaaaattcaagctcctctgatt
aaccagtacagtttaaccttgggtcaggacatgggcctgcatgacaccaagtctctcatc
aagtgtgtggagtcactgtcttttattgtacgcgacgccgcacacgtcacacctgagaac
tttgagctttgtgtgaaagcaattcgagtgtttgtggaagccagtcttaatggaggttat
cgcacacacgagaaaaaaaagagccacaaatacgactcaaaagccagtcggctacggaag
aagccaagagagaaagagggtgtgtcccgccgagctaaacccaccagtcagcggccgtcc
cgttcccacagtgacgatgaggaggacgagggggtgccagccagctaccatacggtgtct
ttacaggttagtcaggacttattagatttgatgcatacactgcacacgcgggcagccagt
atctatagctcatgggcagaagaacagcgccatctggaggcaggtggaaagaagattgaa
gctgactctcagacactctggtcaagttgctggtgtcctttgctccaaggtatggcctgg
ctgtgctgtgacgctaggaggcaagttcggatgcaggccctcacttacctccagagggcg
ctacttgtacatgatctgcaaacactggatgctgtggagtgggaatcctgtttcaacaag
gtcctgtttccgctgctgactaagctcttggacaacatcagtccagcagatgtcggtggc
atggaggagaccaggatgagggcctgtacactgctctccaaggtgttcctccagcatctc
tcaccactgctttctctgcccacttttgctgcgctctggcttaccatcctagacttcatg
gacaagtacatgcacgctggctccagtgatctcttgttggaggcgatccccgagtctttg
aagaacatgcttttggtgatggacacagctgggatcttccacaatgcagactcgcgtaca
ggctactctgatctgtgggagatcacatgggagagaattgactgcttcctgccccatctc
cgagaggagctttttaaacaagcggtcatgccagaacctgtccctagtgttcctgtagaa
cctgcccctgcttctgttcctatttcttcaccctcccctcctgtgccattccctgcacca
gtgccaactgcctcaccagagccaaagacccccagcagacctgcatctcctcaggacata
caaacacccagtgccaacggaaatgacagatcgtctccagtgcccccctccacccctcca
atgcccaccccagttaaaagctcatctgacactatgcctactctcactcagtctcctcta
atactccaacccctagcatctccactgcaggtcggcgtgccgcccatgacactgccaatc
atcctaaatcccgccctcatcgaagccacatctcctgtacccctgctttcagtgcctcgt
ccgactgaaccgatcgacacttcagaggtcaaatag
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