Silurus meridionalis (southern catfish): 124377780
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Entry
124377780 CDS
T08004
Symbol
fga
Name
(RefSeq) fibrinogen alpha chain isoform X1
KO
K03903
fibrinogen alpha chain
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124377780 (fga)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124377780 (fga)
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124377780 (fga)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124377780 (fga)
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124377780 (fga)
Hyaluronan
Extracellular matrix or blood plasma proteins
124377780 (fga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fib_alpha
SOGA
HsdM_N
Sigma70_r4_2
DUF2515
Motif
Other DBs
NCBI-GeneID:
124377780
NCBI-ProteinID:
XP_046693012
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Position
24:complement(21123122..21134731)
Genome browser
AA seq
727 aa
AA seq
DB search
MKLHVSFLVLCVFLLSASCEDETSDLLKPRGPRPVEPGFKADKCATEKDWPICTDDEWGR
KCPSGCRIQGLLDQTDHEILGKIDKIRKLLDEGKKLHRSTDQESKNTYNYLRERLVSNAG
NDNRFTSLAEQLRQRIVELKIKIDRQLRVLEAVKAQIKNQFLDVQRLEVDIDMKLRSCKG
SCASYVDFSVEKEGFEALEKQLDRLDTLQVQSVETVSSLKVLKSRVLKDVEVPSIYKSST
TGTERAAQRKTFFTDVDQMQLSLEAEGSTAETAATVSKVSTGTSQSAPIISTTRTSSQTL
SCTQTVRKVTINTKDGVQEKYETVSSGPGCDTIGKLGLSQKDLLSAAKDGKELTADGFTV
KVTGGHSKSITNLNHGDGDLGGFEGDFFKALGSTGQDRKFSTSFTSSSSSSSKSITSGGT
KGFHLDTKSITATSSPFDGGEDLGAFFGGDIEDDVPDLHARSLKSRDERKADFIGGVCES
VGFQKRHTPYTHSRLQCGVNTHRMCSDEDEEIKCSSGCRLQGFIDETDRDVYQHVSNICE
KIEQSNAASSSTLMKTAEFYEAQRRIFIKSYKKELHYAEAAEMLHKNLTLLQEKSTRLSQ
ELQKYLRQTEDQMNKIHQVEKVDIDIKLRACRGSCTHLDHVSDHVTFRSMQEQMSTFHST
TSTKPKTPSLEKKLKVQTVARPRVSLTYRTLPLIHTKLLTKFEDIEQNQLVMEFRADTWN
SDGESQT
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaagctacacgtctctttcctggtcctgtgtgtgttcttactttctgcctcgtgtgag
gatgaaacgtcagatcttctgaaaccgagaggtcctcgtcctgtagaacctggcttcaaa
gcagataaatgtgctacggagaaggactggccgatctgcacagatgatgaatggggaaga
aaatgtccttctggctgccgaatccaaggacttctggatcaaactgaccacgagatcctt
ggaaagattgataaaatccgcaaactccttgatgagggaaaaaaactgcatcgttcaaca
gatcaggaatccaaaaatacctacaactacctgagagagagacttgtttccaacgcaggt
aatgataacagattcacctctctggctgaacagctcaggcagaggattgtggagttgaag
attaagattgaccgtcagctccgagtgctggaggctgtgaaagctcaaattaaaaaccag
ttcctcgatgttcagcgtctggaggttgacattgacatgaagctgcgcagttgtaaaggt
tcctgtgccagctacgtggacttctctgtggaaaaggaaggatttgaagctctggaaaag
cagctggaccgcttagataccttgcaagtgcagagtgttgagactgtcagttctctaaag
gtactgaagagcagagtgctaaaggatgtagaagtaccatccatctacaagtcttcaacc
actggaacagaaagagctgcacagaggaagaccttcttcactgacgtggaccaaatgcag
ctctctctggaggccgagggctccacggcagaaactgctgccaccgtcagcaaggtcagc
acaggtacgagccaatctgcacctatcatctccaccacacgcactagcagccaaaccctc
agctgcacccagacagtgcgcaaagtcacaataaacaccaaggatggagttcaggaaaag
tatgagacggtgagcagtgggccagggtgtgacaccatcgggaaactcggcctttctcaa
aaagatctgctgagtgcagctaaagatggcaaagaactcactgctgatggcttcacagtc
aaagtaactggtggacattcaaaatccatcaccaacctcaaccatggggatggagatctc
ggtgggtttgaaggagacttctttaaggcactgggttctactggacaggatcgtaagttc
tccacatcctttacctcctcctcttcctcctcctcaaaatccatcacttctggtggaacc
aaaggttttcacttagacacaaagtccatcacagccacttcctcaccttttgatggaggt
gaagaccttggcgcgttcttcggaggagacatcgaagatgatgttcctgatctacatgct
cgcagcctgaaatcccgtgacgaacgcaaagcagattttatcggcggagtgtgtgaatca
gttggatttcaaaaacgacacactccatacacacactcgagactacagtgtggagtgaac
acacaccggatgtgcagtgacgaggacgaggagataaaatgttcttcaggatgccggctg
cagggttttattgatgagacagacagagatgtttatcagcatgtcagcaacatctgtgag
aagatcgaacaatctaacgctgcatcttcatccacactgatgaaaacggctgagttctac
gaagcacagaggagaatcttcatcaaatcctacaagaaggaactgcactatgctgaagcc
gctgagatgctccacaagaacctcacactactacaggaaaagtccacacggctctcccaa
gagctgcagaagtatctcagacaaactgaggaccagatgaataaaatccatcaggtggag
aaggtggacattgacatcaaactgcgtgcttgcagaggatcatgtacacaccttgaccat
gtgtctgatcacgtgacgttcagatcaatgcaggaacaaatgtccacgttccactcaacc
acctccacaaaaccaaaaacaccttccctggagaaaaaactcaaagtccagactgtggct
cgtccacgtgtctctctcacctacagaacactgcctttaattcacacaaagcttctcaca
aagtttgaggacatcgagcagaaccagctggttatggagttccgagcagacacgtggaat
tctgatggagaatcgcaaacctag
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