Silurus meridionalis (southern catfish): 124377814
Help
Entry
124377814 CDS
T08004
Symbol
pgap6
Name
(RefSeq) post-GPI attachment to proteins factor 6
KO
K24576
transmembrane protein 8A/B
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
124377814 (pgap6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3522
GMPPB_C
Motif
Other DBs
NCBI-GeneID:
124377814
NCBI-ProteinID:
XP_046693068
LinkDB
All DBs
Position
24:complement(20957442..20967804)
Genome browser
AA seq
785 aa
AA seq
DB search
MKLLSSKMAGTTVKWFWLWNAAACCCLADDVSYVSGFYSNTPQRLSKYSWFGNARLFRFR
VPEEAELVRWSLTVLRGSGFSCGDQNVTVHFRAGAPPVINPINTAFPNSTAFSQAFNLTL
SVRNGQAFSVTLFNLTQPEAGDWFIAAHLPKDDGRIEQQGLPSCSYLLQPQMYVRRAVDT
PILQTDIPLTRTLTQQHAPFRVFVPEFSSKLDIFIHSCSVQSIPVTDCSLSITLGSASLG
QSSVSTVNCSGNETCSASLSSPPWNTWVRVSVGTSQVNTTMTFTISANYTAGCLPSSVPL
DVNISFPLSTSSLLSSLLSSLLSSSQNSSGGVSQNSSGGVSQNSSGGVSQNSSGGVSQNS
SGGVSVYSEGCVQTPLVLREVQDVFSVHFTVVNGNVTTLSHIPTFLTLELESADTGGVLL
LQLDLNTSSVIGPFDSVRACLTPSAPVLQLNTSQSCDAAFMTGYPLRVNSSETKAVLRVP
FPRAVTWYLSLQTICNNSMVCRNVSAVVGVSVSVSACVDDCGPYGECRLLRTQSYLYAAC
VWLGWSCSDGSSALSFSRQLAAVLLLTLSNLLFIPPIAVALYRGYHAEAIVYLFTMFFST
FYHACDQPGVTVLCIMDYDTLQFCDFLGSVVAVWVTIVCMARLRQILKYVFFLGGTLVIA
MTMQLDRRGLWNLLGPVLFALAIMLTAWIYRGVKRHHCYPPTWRRWVFFLIPGIVSALIG
LCVYAFAQTDANYYYTHSIWHIMVATSVVFLLPPREKNTPPWGWARKLCGYKLCLNPKEE
LHIVS
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaagttattaagttctaagatggcaggaacgacagtgaagtggttttggctgtggaac
gctgcggcctgctgctgtctggctgacgacgtcagctacgtcagcggtttctactccaac
acgcctcagagactgtcgaagtacagctggttcgggaacgcacgcctgttccggttccgg
gttccggaggaggcggagctcgtgcgctggtccctgacggtcctgcgtggctctgggttc
agctgcggagaccagaacgtcacagtacactttagagccggagcgccgcccgtcatcaac
cccattaacacggcgttcccgaactccacggcgttctcccaggcctttaacctgaccctc
agcgtgaggaacggccaggccttcagcgtcacgctcttcaacctcacgcagcctgaagcc
ggagactggttcatcgccgctcatctacccaaagacgatggcaggatagaacaacagggc
ctgccatcatgttcatatttgctgcagccgcagatgtacgtgaggagagccgtggacacg
ccgatcctgcaaaccgacattccacttactcgaacactcactcagcagcatgctccgttc
agggttttcgttcctgagttctcctctaagctggacatcttcatccactcgtgctctgtc
cagagcattcctgtgactgactgctcgctgtccatcactttaggctccgcctctttgggt
cagagctcagtgagtacagtgaactgctcggggaatgagacatgctctgcttctctgtcc
agtccaccctggaacacctgggtgagggtttcagtgggaaccagccaagtcaacaccacc
atgaccttcaccatctcagcaaactacacagcaggatgtttgccctcgagtgttccctta
gatgtgaacatctcgttccccctgagcacctcatctctcctctcgtctctcctctcgtct
ctcctctcatcctcccagaactcctcaggtggtgtctcccagaactcctcaggtggtgtc
tcccagaactcctcaggtggtgtctcccagaactcctcaggtggtgtctcccagaactcc
tcaggtggtgtgtccgtgtactctgagggatgtgtacagacccctctggtgttacgtgag
gtgcaggacgtcttctcagttcattttactgtcgttaacggcaacgtgaccactctgtcc
cacatccccaccttcctgacgctggagctggagtctgctgataccggaggggtgctactg
cttcagctcgacctcaacacgtcctctgtgattggtccatttgacagtgtgagggcatgt
ctaacaccttctgctccagttcttcaactcaacacaagccagtcatgtgatgcagctttc
atgacaggatatccactccgagtgaacagtagtgagacgaaggcggtgttaagggttcct
tttcccagagcagtgacatggtacctcagtctccaaaccatctgtaataacagcatggtg
tgcaggaacgtctcggccgtggtgggcgtgtctgtgagcgtgagtgcgtgtgtagacgac
tgcggtccatacggagaatgcaggctgctgcgcacacagagctacctgtacgctgcctgt
gtgtggttggggtggagctgctcagatggatcgagtgctctgtcgttctcccgtcagtta
gcagcggtgctcctgctcacgctcagtaacctgctcttcatccctcccatcgctgtagcg
ctttaccgaggctaccacgctgaggccatcgtctacctcttcaccatgttcttctccacc
ttttatcatgcgtgtgatcagcccggtgtgacggttctgtgtataatggactacgacacg
ctgcagttctgtgattttctgggttcggtggttgccgtgtgggtgacgatcgtctgcatg
gctcgactcagacaaatcctcaaatacgtcttcttcttgggtgggacgctggtgatcgcc
atgacgatgcagctagaccgcagaggtctgtggaacctcctaggtcctgtgctgtttgcg
ttagctatcatgctaaccgcttggatataccgcggtgtgaaacgccaccactgttatcct
cccacatggaggcgctgggttttcttcctgatccctggcatcgtgtcggcgctcatcggc
ctgtgtgtgtacgccttcgctcagaccgacgccaactactactacacacactccatctgg
cacatcatggtggccaccagcgtggtgttcctcctcccaccacgcgagaagaacacgccc
ccctggggctgggcacgcaaactctgtggatataaactctgtcttaacccgaaggaggag
cttcacatcgtgtcctga
DBGET
integrated database retrieval system
