Silurus meridionalis (southern catfish): 124377913
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Entry
124377913 CDS
T08004
Symbol
gart
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00230
Purine metabolism
smeo00670
One carbon pool by folate
smeo01100
Metabolic pathways
Module
smeo_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
124377913 (gart)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
124377913 (gart)
Enzymes [BR:
smeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
124377913 (gart)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
124377913 (gart)
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
124377913 (gart)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
RimK
ATP-grasp_2
LUD_dom
Motif
Other DBs
NCBI-GeneID:
124377913
NCBI-ProteinID:
XP_046693244
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All DBs
Position
24:complement(15836051..15867455)
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AA seq
1015 aa
AA seq
DB search
MAERVLVIGSGGREHALAWKLAQSSHIQQVLVAPGNAGTSNCGKISNSAVSVSNHAILAQ
YCKDHNVGLVVVGPEVPLAAGMVDDLTAAGVMCFGPTAKAAQLEASKSFSKSFMDRHSIP
TARWSSFTDPQKACSYIREADFPALVVKASGLAAGKGVIVAKDKDEACQAVLDIMKDKTF
GTAGDTVVVEELLEGEEVSCLCFSDGSTVAAMPPAQDHKRLLDGDRGPNTGGMGAYCPTP
QVPEEMLQQIKTAVLQKTVDGMKQEGIPYVGVLYAGLMLTKQGPKVLEYNCRFGDPECQV
LLPLLKSDLYEVLKNTLQAKLASSPPVWLENCAAVTVVMASEGYPGSYKKGVEITGLSQL
TEKGLQVYHAGTALKEGGGVVSSGGRVLTVTAVCPNLETALHSANEGVAAVGFPNAVYRR
DIGHRAIAYLTRSRVLTYKDSGVDIAAGNKLVELIKPLAKATSRPGCNAELGGFAGLFDL
KAAGFVDPILVSGTDGVGTKLKIAQACNVHSTLGQDLVAMCVNDVLAQGAEPLFFLDYFS
CGQLDVGVTSSVIRGIAEACQIAGCALLGGETAEMPGVYGAGEYDLAGFCVGAVERESLL
PRLGDIQEGDVLIGVASSGVHSNGFSLVRKILERAGLQYSSPASFGQAGQTVGEVLLTPT
KIYSRLLQPILRSGAVKAYAHITGGGLLENIPRVLPKELAVDMDATHWRIPPVFSWLHNE
GALSEEEMSRTFNCGLGAVLVVGKQDAQRVLRQVQAQEEAWIVGSITHKLSGAEAVVIRN
LKHSLKAGPRPSADPSVPQNDACQIHSSSRRRTKVAVLISGTGTNLQALMEQTKKPSSSA
EIVVVISNRPGVLGLKRASMAGIQTRVVDHKLYGSRMEFDSTIDRVLEEFGVELVCLAGF
MRILTGPFVRKWNGKLLNIHPSLLPSFKGVNAQKQALLAGVRITGCSVHFVAEEVDAGAI
IVQDAVPILINDTEDSLSERIREAEHRAFPAALELVASGAVRLGEDGHIIWNQSA
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcgtgtgcttgttattgggagtggtggacgtgagcatgcactggcatggaag
ctggctcagtcatctcatatccagcaggtcctagttgcccctggcaatgcgggcacaagc
aactgtggaaagatctccaactctgctgtgagtgtgagtaatcatgccatcctggcacaa
tattgcaaagaccataatgtgggactggtggtggttggtccagaagttcccttagctgca
ggtatggtcgatgatctaactgcagcaggtgtaatgtgtttcgggccgactgcaaaggca
gcacagctggaagctagcaaaagtttctcgaaaagtttcatggatcgtcacagcatcccc
acggcccgctggagctccttcactgatccccagaaggcctgcagttacattcgagaagcg
gattttccagcacttgtggttaaagccagtggactggctgctgggaaaggagtgatagta
gcaaaggataaggacgaggcctgtcaggcagtactggacatcatgaaggataagacattt
ggcactgctggtgatactgtggtggttgaagaactgcttgaaggagaggaagtttcatgt
ttgtgttttagtgatggctccacagtggctgctatgcctccagcgcaggaccataagcgg
ctgctagatggagatcgaggtccaaacacagggggaatgggtgcctactgtccaacccca
caggtgcctgaggagatgcttcaacaaattaaaaccgctgtactacagaagactgtagat
ggcatgaagcaagaggggatcccgtatgttggtgtgttgtatgcaggactcatgttgact
aagcagggaccaaaggtgctggagtataactgccgatttggagaccctgaatgtcaggtg
cttctgcccctcctgaagagtgatctgtacgaggtcctgaagaatacactccaagccaaa
cttgcttccagtcctcctgtgtggctggaaaactgtgctgcagttactgtggtcatggcg
agtgaagggtatccgggatcctacaagaaaggagtcgagatcacagggctgtcccagctc
acagaaaaggggttgcaggtctaccatgctggtactgccctgaaagaagggggcggagtt
gtgtctagtggtgggcgtgttctgacggtcacagctgtgtgtccaaatttggagactgcc
ctgcatagcgcgaatgagggcgtagctgctgttggcttcccaaatgcagtgtaccgtcgt
gacattggccaccgcgccatcgcctacctcactcgctccagagtactgacttataaggac
agtggagtggatatagcagcaggaaacaagctggtggaattgattaaacctctagccaag
gccacatctcgcccaggatgcaatgctgaacttggaggctttgctggactgttcgatctg
aaagctgctggatttgttgaccccatactcgtatcgggaactgatggagttggcaccaaa
cttaagattgcacaggcatgcaacgtccacagcacccttggacaagacctggtagccatg
tgtgtgaatgatgttttggctcagggggcagagccactcttcttcttagattacttctct
tgtgggcagttggatgtcggcgtgacttcctctgtgattcgtgggattgcagaggcttgc
caaatagcaggctgtgccttactgggtggtgagactgctgagatgccgggagtatacggt
gcaggagagtatgatttggctgggttttgcgttggtgcggtggaacgtgaatcccttctc
cccagattaggagacattcaggaaggtgatgtcctaattggagtagcctcctcaggagtg
cacagcaatggctttagtctagtaaggaagattctggagcgagctggacttcagtatagc
tctccagcttcatttggacaagctggacaaactgtgggtgaggtgctgcttacaccaact
aaaatctatagccgccttctccaaccaatcctgcgcagtggagcagtaaaagcctatgcc
cacatcactggaggcgggcttctggagaacattcctagagtcctgccaaaggagctggct
gtagacatggatgccacacattggcggattcctcctgtattctcctggctccacaatgaa
ggcgctctttctgaggaggaaatgagtcgcacttttaattgtggcctcggagcggtgctg
gtagtggggaagcaggatgcccagagggtcctgagacaagtgcaggcccaggaggaggct
tggattgttggctcaatcacacacaaattgtctggtgcagaagctgtggtgattagaaac
ctgaagcacagtctgaaagcaggtccccgtccatctgctgaccccagtgttccacagaac
gatgcatgtcaaatccattccagctctcgcaggagaaccaaagtggctgttctcatctcg
gggacaggcaccaatcttcaggcactgatggaacagaccaagaagccatcaagttctgct
gagattgtggtggtcatttcaaaccggccaggtgtcctgggcttgaagagagcctctatg
gcaggcattcagacacgggtggtagatcataagctgtatggcagccggatggagtttgac
agcaccattgaccgtgttctggaggagtttggagtggagctagtgtgtctcgccggcttt
atgagaatcctcaccggaccctttgttagaaagtggaatggaaagctgctgaacatccat
ccgtcactgctgccttccttcaaaggggtgaacgcacaaaagcaagcactgctggctggg
gttcggataaccggctgcagtgtgcactttgtggctgaggaggtggatgcaggagctatc
atcgttcaggacgctgttcctattctaataaacgatacagaggacagtctatcggagcgt
atccgggaggcagagcatcgggccttccccgctgctttagagcttgtagcgagtggagca
gtgagacttggggaggacggacacatcatctggaaccaatcagcatag
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