Silurus meridionalis (southern catfish): 124377961
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Entry
124377961 CDS
T08004
Name
(RefSeq) protein SON isoform X1
KO
K23718
protein SON
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124377961
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
124377961
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
G-patch
DND1_DSRM
dsrm
RSRP
G-patch_2
Motif
Other DBs
NCBI-GeneID:
124377961
NCBI-ProteinID:
XP_046693333
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Position
24:15889340..15903676
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AA seq
1116 aa
AA seq
DB search
MATNIEQIFRDFVMNKIKEIEDESQDKSNTDNMESNNGESHSDQGTGINIDATQAEAMST
VTDIVVKISPRGNSVKEEFNTKHKKSKKHKKHKSKKKKKKLKERKESSSDSESGGETQES
VKKKKRKKKKKHKHGEKGKKFDSQSGSSSESESESEIKPVCETAKALSGKVAQDLPDIIP
KLETASDKHKEREKSQRSSSRSRTSRQDKSKRRQRSNSSSGKQRTRCRSRSRSARRSSRT
RSKSLSRRESVQKRRRSRSRSGSRQRNRRSRSISARRGRRSRSRSRSRQHRSRSYVRKSR
RSRSKSRSCSQLSRRSRSQRQERHSMSSSRSKSRSHDQPPESETQISTAAEIRHEDKSSP
IINLSHAENGDEEKSQIEPVNPSDGVINDGQGARFAGSWKPIPFLDVGVTVVGSSETTTT
AKCITPTMPLDINDVSENTLAEDLHSTENKEVITLVEQKDSQIFKQKSISPNRKRSKSSS
RERSTSSSSLKQRKSRSSSRNSRKSPLQKKRSRSRKRARRSKSKSPKRKRSKSHSPRRRR
RSRTSERNRSKSRHRSRSNSRRSRSGSRRKRGGFRSRMFSQRDRWKREPSHSPVVILRKK
GLTSRTQRSASQTPPRLTELDKEQLLEIAKANAAAMCAKAGMPIPESLRPKAIFQLPLPN
PNSTSLPLPLPLPVNLPMGLQGMSSMTMNAAMASMTAATMTAALSGMNTLAAMPQMAPLP
TITNKPPPSSAPNLNMVNIEEAKKKLAKQANSYSIKELTEKCKKIAESKEEMAVAKPHVS
DDEDDRPFGGVALKENKGITFSLSNPSVKPAVRSEAAFAKEFPVSSGSQHRKKEEDGVYG
EWVPVDKKTEKAGAPSASAEAEDQSKAKDSVFPEAPTQPVDITLAISERAVAQKRLAENP
FDINAMCMLNRAQEQVDAWAQSNTIPGLFTGSTGAQVLSSEELSNSGPQAWIKKDQFLRA
APVSGGMGELLMKKMGWRAGEGLGKHREGTVEPILIDFKTDRKGLVAEGEKTQKSGNLVM
MKDLLGKHPVSALMELCNKKKWQQPEFIMVLHSGPDHRKNFLFKVVVNGCEYQPQTASPN
KKHAKAMAATVALQAMGEIAGDSVHSGPQFTAATST
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaacattgagcagatttttcgggattttgtaatgaataaaataaaggaaata
gaagatgaaagccaggataagagcaatacagacaacatggaatctaataatggggagtcg
cactctgaccaagggacaggcataaatatagacgcaactcaggctgaagcaatgagcaca
gtcactgatatagtcgtgaaaatttcgcctcgaggcaacagtgtcaaagaagaattcaat
acaaaacacaagaaatcaaaaaagcacaaaaaacacaaaagcaaaaagaagaaaaagaaa
ctcaaggaaagaaaagagagcagctctgactcagagtctggtggagagacacaggaaagt
gtgaagaaaaagaagcgaaagaaaaagaagaaacataaacatggagaaaaagggaaaaag
tttgattcgcagtctggtagctcttctgaatcagagtctgaatcagaaataaaacctgtg
tgtgaaactgctaaagcattatctgggaaggtggctcaggatttacctgacattattcct
aagctcgagactgcttctgacaagcacaaagaacgtgaaaaatcccaaaggagttctagt
cgctcacggacatcccggcaagacaagagcaagagaaggcagcgttccaattccagctca
ggcaaacagagaacaagatgtagatccagatctcggtcagcgaggcgatcttcaagaaca
cggtcaaaatcactatcaagaagagagtcagtgcagaaaagacggagaagccggtccaga
tcaggatcacgccaacgtaacagacggtccagatcaatttcagccagaagaggaaggaga
tcacgatccaggtcacggtctagacaacatagatcaaggtcttatgtaaggaaaagcagg
agatctcggtcaaaaagtaggtcttgttcgcagctttccaggcgatctaggtctcagaga
caggaaaggcattctatgtcaagttcccggtcaaaatcgagatcacatgatcagcctcct
gagagtgagacacagatcagtacggctgcggaaataaggcatgaagataaatcatctccg
atcataaatctaagtcatgcagaaaatggagacgaagaaaaaagtcagatcgaaccagtg
aacccatcggacggcgttataaatgatgggcaaggagctagatttgctggatcatggaaa
ccgattcctttcttggatgtaggtgtgactgttgttggctcctctgaaaccaccaccaca
gcgaagtgcattacacccacaatgcctttggacattaatgatgtttcagaaaatacctta
gctgaagacctccacagtactgaaaataaagaagttattactcttgttgagcagaaagac
tcccaaatatttaaacagaagtccatatcgccaaatcgaaagcgttccaaatcatcctcc
agagaaagatcaacctctagctcttctttaaaacaaaggaagtccagatcatcctccaga
aacagcaggaagtctcctttgcaaaaaaaaagatccaggtccagaaaacgggctaggcgt
tctaaatccaagtcacccaaaaggaaaaggtcaaagtcccattcgccgagacgccggaga
cggtctaggacctcagagagaaatcgatcaaaatctagacacaggtctcgctcaaactcc
agaaggtccaggtccggttcacgccgtaaaagagggggtttcaggagccgaatgtttagt
caacgggatcgatggaaacgagaaccgagccattctcctgtcgtcatcctgcggaaaaaa
gggttgacctctcgaactcagcgtagcgctagccagacgcctcctcgccttactgagctc
gataaagaacagttgcttgaaattgccaaggccaatgcagcagcgatgtgtgctaaagct
ggtatgccaattccagagagtctgagaccaaaagccatctttcagctgcccttgccaaac
ccgaattccacttcgttgcccttacctttgcccctacctgttaatctccccatgggacta
caagggatgtcaagcatgaccatgaatgctgcaatggccagcatgactgccgccaccatg
accgcagctctttccggcatgaacacattagctgccatgccacagatggcccccttgccc
acaataaccaacaagcctccaccttcgtccgcgccgaacctaaatatggtcaatatcgag
gaagcgaaaaaaaaattggcaaagcaagcaaacagctacagcatcaaggaactcacagaa
aaatgcaaaaagattgcagaaagtaaagaggagatggctgtcgcaaagccacatgtttca
gatgatgaagacgaccggccctttgggggagttgcccttaaggagaataagggcattaca
tttagtctcagtaacccctctgtgaagccagcagtaaggtctgaggccgccttcgccaag
gagttcccagtgtcttcaggttcacagcaccgcaaaaaggaggaggatggagtgtatgga
gaatgggtgcctgtggacaaaaagactgaaaaagcaggggctccttcagcatctgctgag
gctgaggatcagagcaaagccaaagacagtgttttcccggaggcgcccacacagccagtg
gacatcacacttgcaattagtgaaagggcagtggcacagaagagactggcagagaatccc
tttgacatcaatgccatgtgcatgctaaatcgtgcacaggagcaggttgatgcttgggcc
cagtccaacacaatcccaggtctattcactggttctacaggtgctcaagtgctctcatct
gaagagctgtccaacagtggtccacaggcttggatcaagaaggaccaattcctgcgtgct
gccccagtctcaggaggcatgggagagttactaatgaaaaagatgggttggcgtgctgga
gaaggcctcggcaaacaccgagaaggcacagtggaacccatcttaatagacttcaaaact
gaccgcaagggactggtagccgagggggagaagacccagaaatctggaaatctggtcatg
atgaaagatcttttagggaagcacccagtgtccgctctaatggagttgtgcaacaagaaa
aaatggcaacagccagaatttatcatggtgctccacagtggtcctgatcaccggaagaat
tttctgtttaaggtcgtggtgaatggatgtgaatatcaaccccagacagccagccccaat
aaaaagcatgccaaagccatggcggctacagtagctctgcaggctatgggggagatcgca
ggggacagcgtgcattcaggacctcagttcacggcagccaccagcacctga
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