Silurus meridionalis (southern catfish): 124378062
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Entry
124378062 CDS
T08004
Symbol
grin2ab
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04020
Calcium signaling pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124378062 (grin2ab)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124378062 (grin2ab)
04082 Neuroactive ligand signaling
124378062 (grin2ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124378062 (grin2ab)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
124378062 (grin2ab)
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Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
124378062
NCBI-ProteinID:
XP_046693507
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All DBs
Position
24:complement(20436446..20508161)
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AA seq
1466 aa
AA seq
DB search
MGVTVRLALMTWALLGWSQAAESAPSLSVAVILGETRGVPERALRPAPGVGAPLDISVLA
VQVNHTDPGSMLTHLCQLMARQRLHGLVYGDGTDQEAIAQMLDFVSSQTAMPILGVHGGA
AMTMAEKDTSSSFFQFSASLHQEALLMLSVMEEYDWHVFSVVTTRFPGHQEFLATIRVTV
EHSFVRWDLQSVVTLDGVGEPEDRAHVQLKRIQSPVIMLYCSKDEAELVLAEARSLGLVG
AGFVWIVPSLTSGNPERTPEAFPPGMISIAYDEWDYPLETRVRDAVGIFSHAAAAMFREQ
GRIPDGTVSCMGQAEKPEVPASALRRYMMGVNLEGRDLSFMDDGYQVNPKLVVIVLNTER
EWEKMGRWENHSLILKFPVWPRYNSFGDAEADENHLSIVTLEEKPFVIVDDVDILTGTCM
RNSVPCRKHIKDNATGGSYLKQCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKKINNM
WNGMVGEVVYKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEP
FSASVWVMMFVMLLIVTAIAVFLFEFISPLGFNRNLAQGKDPHGPSFTIGKAIWLLWGLV
FNNSVPVQNPRGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDRKFQS
PYSFSPPFRFGTVPNGSTERNIRKNYPDMHQYMVKYHQTGVQDALISLKTGKLDAFIYDA
AVLNYMAGRDDGCKLVTIGSGYVFATTGYGIALQKGSYWKRLVDLAILGIIGDGEMEELE
AQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLAAAMALSLLTFFWEHLFYWRLRYCFTGL
CSGRPGLLFTISRGIWSCIHGVHIELKKHPELDFSPQANMLHLLKSAKEITTLGVTSPKQ
PVASILPPTTGLLELMTGGKGNNLPPKDAIYNNINTMIANRHKDPLNNTLLPGQCALTLA
NAQSGVPGSVGIGGGGGGAGGAGVGGGGGGGDDSGLPASKSRALWKKSVETVRQNQGPTK
NSPPSSAPVYEPHATMKSQRYLPEDLPACSDMSDCSGRMDLQKQHKVKDTLRKRNRLPRD
LSDVELSALPSQASLQNNHGSQIYSQNSQSSQIYTIDSVDQEHGLHYPDIFNEHRDNKHR
PPSSSEQQPILQLNSNLFPPSHEPDVMQNATTVAKEKKFNTYGKSGGIGLNPSVTIPAQD
HRQTHCRSCLSKFSGYSGLYTMRAPQYRCEACLHSANLYDISEDQFLHPNIGAIRGGSVD
RSFCAFLPHPNASFTAYLPQSDQDGDGLISHYQNEGIYIHRQHSYENLPQKNLSRRVSLQ
DSTPHTNLHTSTMVPDKLSKSQSTQLNHTLASVGVSGLGIGRRSKSMYPAQPTENPFLQT
LRDDQRLAHGRSATDIYKQLVPLTLSPVVDSKGPGIGVATPDLFYPEHVMPYVALSPVGT
FPAQRAMSAGGARRVYKRMPSIESDV
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcacagtacgcctggcactgatgacctgggctctgctgggctggtctcaggca
gctgagagtgcaccctctctgagtgtggcggtgatcctgggcgagacccgcggtgtcccc
gagcgggcattgcgcccagcaccaggtgttggagcaccgctggacatcagcgttctcgca
gtgcaggtgaaccacacagacccaggcagcatgcttacccacctctgccagctcatggca
cgccagcgattgcatggccttgtgtatggagacggaactgaccaggaagctattgcccag
atgctggactttgtctcctcccagactgccatgcccattctgggtgtccatggaggtgca
gccatgaccatggctgagaaggacaccagctcctcatttttccagttcagcgcctcgctc
catcaggaagccctgctaatgctgtccgtcatggaggaatacgactggcatgtattctcc
gtggtgaccaccaggttccccgggcaccaggagtttctggcaaccatccgtgtgacagtg
gagcacagtttcgtgcgctgggacctgcagagcgtagtgacgctggacggtgtgggcgaa
cccgaggacagagcacatgtgcagctgaagcgcatccagtcacctgtcatcatgctgtac
tgctctaaagatgaggccgagctggttctggctgaggcccggtcgctcgggttggtcggc
gctggctttgtctggattgttcccagtcttacctccgggaacccggagcgaacgcccgaa
gcttttcccccgggaatgatttccatagcgtacgacgagtgggactatcctctggaaaca
cgcgtgagggacgcggttgggattttcagtcacgccgccgccgctatgttccgagaacag
ggccggataccggatggaaccgttagctgcatgggtcaagcagaaaaaccagaggtcccg
gcaagcgcgttacgcagatatatgatgggtgtaaatctggagggcagagatctgtcgttc
atggacgatggctatcaggtgaaccctaaactggtggttattgttctcaacactgagagg
gaatgggagaagatgggccgctgggagaaccattctttgatactgaaatttcctgtgtgg
ccacggtataactccttcggagacgccgaagcagacgaaaatcacctgagcattgtgacg
ttggaggaaaagccatttgtgattgtagacgacgtggacattctgacggggacatgcatg
cgcaattctgtcccctgcaggaaacacatcaaagataacgctaccggtggatcgtatcta
aagcagtgctgtaagggtttctgtattgatatccttaagaagatcgccagaaacgtgaag
ttcacgtatgacctttacctggtgactaacggcaaacacggcaagaaaatcaacaacatg
tggaacggcatggtgggcgaggtggtttataagaaggccgtgatggctgtcggttcgttg
accataaacgaggagaggtcagaggtcatcgacttctctgttccatttgtggagactggg
atcagcgtcatggtttctcggagtaacgggaccgtatcgccatcagcctttctggagcct
tttagcgcgtcggtgtgggtgatgatgttcgtcatgttactcattgtcaccgcaatcgct
gtcttcctgttcgagttcatcagtcccctgggcttcaacagaaacctcgcacaaggcaaa
gaccctcatgggccgtctttcaccattgggaaggccatctggcttctgtggggccttgta
ttcaacaactcagtaccggttcagaaccctagaggcaccaccagtaagttcattgtgtcc
gtgtgggccttcttcgccgtgatcttcttggccagttacactgccaacctggctgccttc
atgatccaggaggagtttgtggaccaggtcactgggctcagtgacagaaagttccagagc
ccgtattccttctcgccgccgtttcgttttggtacagtcccaaatggcagcactgagaga
aacatcaggaagaactacccagacatgcaccagtacatggtcaaataccaccagactggt
gtccaggatgcactgatcagcctaaagacaggcaagctggatgcgttcatctacgatgcg
gccgtgttgaactacatggctgggagagatgatggttgtaagctggtgaccattggaagt
ggctacgtctttgccaccactggttacggaatcgccctccagaaaggatcctattggaag
cggcttgtggacctagccattctagggattattggagatggtgagatggaggagctggag
gcccagtggctcacaggtatctgccataatgagaaaaatgaagtaatgagcagccaactg
gatgtggacaacatggctggcgtgttttacatgctggcagctgccatggcactttctctc
ctcacattcttctgggagcacctgttttactggcgactgcgctattgcttcactggacta
tgctcgggaagacctggacttctctttaccatcagcaggggtatctggagttgtattcat
ggtgttcacattgaattgaagaagcatcctgagttagatttcagtcctcaggccaacatg
ttgcacttgctgaaatcggccaaggagattaccactctaggggtcacttcacctaaacag
cctgttgccagcatcctccctcctacaaccggattgctagaattaatgactggtggcaaa
ggcaataaccttcctcccaaagatgcaatctacaataacatcaacaccatgattgcaaac
cgacacaaagaccctcttaacaacacccttttgcctggtcagtgtgcccttaccctagcc
aatgcccagtctggtgttccaggcagtgtcggcataggaggtggtggtggtggtgctggt
ggtgctggtgttggtggtggtggtggtggtggtgatgactcaggactacctgcttccaag
tctcgagctctctggaagaagtcagtcgaaactgtgagacagaaccaaggacctaccaaa
aattccccaccttcctctgcaccagtctatgagccacatgcaactatgaaaagccagcgg
tatttgcctgaagatctgccagcatgctcagacatgtctgattgctctggtcgcatggac
ctgcagaagcagcacaaggtcaaagacactctccgtaagcgtaaccgcctgccacgggac
ctaagtgacgtggagctatctgctttgcccagccaagccagcctacagaacaatcatggt
tctcagatctattcgcagaacagtcagagcagccagatctacactattgactcagtagac
caagagcatggactacactacccagacattttcaacgagcacagagacaacaagcatcgc
ccaccatcttcttcagaacaacagccaatactgcagcttaacagcaacctgttccctccc
tctcatgagccagatgtcatgcagaatgccacaactgtggccaaggagaaaaagttcaat
acttatggaaagtctggtgggataggactcaatccgtctgtaaccattcctgcccaggac
cacaggcaaacccactgccgtagttgtctctcaaagttctctggctattctgggctttat
actatgcgagctccccagtatcgctgtgaagcatgtctgcactctgccaacctgtatgac
ataagtgaggatcagttcctgcacccaaacataggtgccattcgaggagggagtgttgac
aggagcttctgtgcatttctgccacatcccaatgcttcctttacggcctatcttccccag
agtgaccaagatggcgacgggctcattagccactatcagaacgagggcatttacatccat
cgccagcactcttatgagaacctgcctcaaaagaatctttcacgacgcgtgagccttcag
gacagcactccgcacactaacctgcacacatccaccatggtcccggacaaactttcaaag
agccagtcaacacagcttaaccacacacttgcttcagtaggtgttagcgggctcggcatt
ggccgacgcagcaagtcgatgtatccagctcagccaacagagaaccctttcctgcagacg
ctacgtgatgaccagcgcttggctcatgggcgcagcgccacagacatttacaaacagctg
gtgccacttacattaagtccagttgtcgacagcaaggggcccggcataggggtggcaaca
cctgacctcttttaccccgagcatgttatgccttatgtagccctttccccagtcggcaca
ttcccagcccagagagcaatgagtgccggaggtgcacgacgtgtctacaagaggatgccc
agcattgaatctgatgtctga
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