Silurus meridionalis (southern catfish): 124378106 Help Entry 124378106         CDS       T08004                                  Symbol atg4da Name (RefSeq) cysteine protease ATG4D   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism smeo  Silurus meridionalis (southern catfish) Pathway smeo04136   Autophagy - other smeo04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:smeo00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     124378106 (atg4da)    04136 Autophagy - other     124378106 (atg4da)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:smeo01002]     124378106 (atg4da)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:smeo04131]     124378106 (atg4da)    03029 Mitochondrial biogenesis [BR:smeo03029]     124378106 (atg4da) Peptidases and inhibitors [BR:smeo01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    124378106 (atg4da) Membrane trafficking [BR:smeo04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     124378106 (atg4da) Mitochondrial biogenesis [BR:smeo03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     124378106 (atg4da) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C54 Motif Other DBs NCBI-GeneID:  124378106 NCBI-ProteinID:  XP_046693576 LinkDB All DBs Position 24:5666657..5674315 Genome browser AA seq 480 aa AA seqDB search MNTVTPGAAQYMRGGALHNDLVDGRRLTPPPSSPQVPETRGHFGNGSLGDGAGEPDEVDK LKLKLRSAWNNVKYGWSVKSKTVFNKTSPLILMGQSFILNSEEEVERFRLAFGSRVWLTY RKEFPQLDGSNLTSDCGWGCMLRSGQMLLAQGLMLHHLPRNWRWPDCPQLTDVDFEVLRP RSPSRPSGISMPSFSSTWSASGSKKRVSSSNLKGDDSQTESRHRRLVSWFGDEPAAPFGV HRLVELGKDSGKKAGDWYGPSLVAHILRKAVDKNTEFDDLVVYVAQDCTVYKGDVMQLCE QTSPDSRWKSAIILVPVRLGGDSLNQSYTECIKNLLKSDFCIGIIGGKPKHSLFFIGFHD EQLLYLDPHYCQLVVDVTQENFPLESFHCNSPRKMNFNRMDPSCTLGFYARTQKDFESLC SSVTQALSLSGERYPIFTIVEGRGQDYGLEGYSRGGTDPSAHILPTDPAIRNSAEGFVLL NT seq 1443 nt NT seq  +upstreamnt  +downstreamnt atgaacacggtcacccccggcgccgctcagtacatgaggggcggggctcttcacaacgac ctcgtcgatgggaggagactcacacccccaccttcttcgccgcaggtcccggagacaagg gggcatttcggtaacgggtcacttggcgacggggccggagagccggacgaggtggataag ctgaagctgaagctgaggtcggcgtggaacaacgtcaaatacggatggtcggtcaaaagc aaaacggtcttcaacaaaacgtccccgctgatcctgatgggacagtccttcatactcaac agtgaagaggaagtggagcgtttccggctggcgtttggctcgcgggtgtggctcacctac aggaaggagtttcctcagctggacggctcgaacctgacgtcggattgcgggtggggctgc atgctgcgcagcggacagatgcttctcgctcaggggctcatgctccatcacctgcctcga aactggagatggcccgactgtcctcagctaactgacgtggatttcgaggtgcttagacct cgctctccgtctcgtccctccggaatctccatgccctccttcagctctacatggagcgca tcgggatccaagaaacgcgtgtcatccagcaatttaaaaggagacgattcgcagacggaa agccggcaccgcaggctggtgtcgtggttcggagacgagccggctgcacctttcggggtt caccggctggtcgagctgggcaaggactcggggaagaaggcgggggactggtacggaccg tcgctcgtcgcacacatcctgcgaaaagctgtggataagaacacggagttcgacgatctg gtcgtgtatgtggctcaggactgcacagtgtataaaggggacgtgatgcagctgtgtgag cagacgtccccggattcccgctggaagtctgccatcatcctggtcccggttcgacttgga ggagattcgcttaaccagtcctacaccgaatgtatcaagaatcttctaaagtcggacttc tgtatcgggatcatcggtgggaaacctaaacactcgctttttttcatcggctttcacgat gagcagctattgtatttagatccacattactgccagctggtggtagacgtaacgcaagag aacttcccgctggagtcctttcactgtaactctcccaggaagatgaactttaaccgcatg gatcccagctgcactctgggcttctacgctcgcactcaaaaggactttgagtctctgtgt tcatccgtcactcaggctctgtccctgtctggagagcgctacccgatcttcaccatcgtg gagggaagggggcaggattacggcctggaggggtacagcaggggaggcacggaccccagc gcacacatcctgcccaccgaccccgcaatcaggaacagcgctgagggattcgtgttgctg tga

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