Silurus meridionalis (southern catfish): 124378141
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Entry
124378141 CDS
T08004
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124378141 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124378141 (runx1)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
124378141 (runx1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
DUF2436
Motif
Other DBs
NCBI-GeneID:
124378141
NCBI-ProteinID:
XP_046693630
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All DBs
Position
24:complement(15928156..15961589)
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AA seq
507 aa
AA seq
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MHNTQGHNCPDTTTGAALDNHVAEGVEQRSEPVKIKSLIKVEVLDGVFQKQPLNMASNSI
FETFPSYQSCFTRDQAPHRRFTPPSSSLATGKMSEALPAMSAHEGGGKLRMCDRSMEVLS
EHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDIPDGTLVTVMAGNDENYSAE
LRNATAAIKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRAIKITVDGPREP
RRHRQKLEEAVKPGALAFSEQLRRSAMRCSPHQASAPNPRPTLNTPPFGSPTHSQIPDTR
QMQTSPSWTYDQSYPYLGAISAPTIHPTTPISPSRNPIHCSDLFSDPRVGLERPFSSIPS
LPDNRFADHRVPYPTAAFTYTPTTVTNAIGIGMSAMTAPAGRYHTYLPPPYPAGSSQGQS
GHFQASSSPYHLYYSSATGSYQFSMMSGGSGGDRSPPRILPPCTSASTGSALLHPSLPNQ
NDIVVEAEESHSSSPTSMSSEAVWRPY
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacacccaaggacacaactgccctgacaccacaactggagcagcattggataat
catgtggctgagggtgtggagcaaagatcagagccggtcaaaattaagagcctcatcaag
gtagaagtgctggatggtgttttccagaagcagcccctcaacatggcttcaaacagcatc
tttgagacctttccatcctaccagtcttgctttacaagggaccaggccccccatcgccga
ttcacgccgccatcctccagcctggccacggggaagatgagcgaggctctgcccgcgatg
agcgcgcacgagggcggcgggaaactgcgcatgtgtgaccgcagcatggaggtcctctcc
gagcacccgggagagctcgtgcgcaccgacagtcccaacttcctgtgctcggtgctgccc
acgcactggcgctgcaacaagactctgcccatcgccttcaaggtagttgcccttggtgac
atccctgatggcacactcgtgacagtgatggcaggaaatgatgagaattactcagcagaa
ctccgcaatgccacagcagccattaagaaccaggtggcacgtttcaatgacctgcgcttt
gttggtcgcagcggaagggggaagagttttacactcaccatcactgtcttcactaatccc
cctcaagtggccacctatcagagagccatcaagattacagtcgacggtccaagggaaccc
cggcgtcatagacaaaagctggaagaagcagtaaagcctggtgctctggccttctctgag
cagttgcggaggagtgccatgagatgcagtcctcaccaagcttctgcacccaatccccgc
cccaccctgaacacgcctccttttggtagccccacccacagccaaatacctgacaccagg
caaatgcagacgtcaccgtcctggacatatgatcaatcctatccttacctgggtgctatt
tctgcacccactattcatcccacgacgcccatctcgcccagccgcaatccaatacactgt
tcggatctgttcagtgacccacgtgtcggtttggagcgtcccttctcctccatcccctca
ctgccagacaaccgcttcgctgaccaccgcgtcccgtaccccaccgcagccttcacctac
actcctaccaccgtcaccaacgctataggtatcggcatgtcagccatgactgcccccgct
ggccgctaccacacttacttacctcctccctaccctgccggctcctcccagggccagagc
ggacacttccaagccagctcttccccctatcacctctattacagcagcgctaccggctcg
taccagttctctatgatgtcgggtggaagtgggggagaccgttcaccccccagaatcctg
ccgccgtgcaccagcgcctcaacgggctcggccctcctccacccctcactgccgaatcag
aacgacattgttgtagaggcagaggaaagccacagcagctccccaaccagcatgtcctct
gaggcagtgtggaggccgtactga
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