Silurus meridionalis (southern catfish): 124378150
Help
Entry
124378150 CDS
T08004
Symbol
rptor
Name
(RefSeq) regulatory-associated protein of mTOR isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04136
Autophagy - other
smeo04140
Autophagy - animal
smeo04150
mTOR signaling pathway
smeo04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
124378150 (rptor)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124378150 (rptor)
04136 Autophagy - other
124378150 (rptor)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
124378150 (rptor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124378150 (rptor)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
124378150 (rptor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
Beta-prop_EML_2
HEAT
WD40_CDC20-Fz
WD40
HEAT_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Cnd1
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_2
WD40_RFWD3
PDS5
Peptidase_C14
Motif
Other DBs
NCBI-GeneID:
124378150
NCBI-ProteinID:
XP_046693677
LinkDB
All DBs
Position
1:complement(984245..1051713)
Genome browser
AA seq
1374 aa
AA seq
DB search
MKMDTELLHSPAVALSEEDEADMSDWNLPLAFMKKRHLEKIEGSKALAQSWRMKDRMKTV
SVALVLCLNVGVDPPDVVKTSPCARLECWIDPLSMSPQKALETIGANLQKQYENWQPRAR
YKQSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEIWVFNKNYTQYIPLS
IYDLQTWMGSPSIFVYDCSNAGIIVKSFKQFALQREQELEQVAAINPNHPLAQMPLPPSM
KNCIQLAACEANELLPMNPDLPADLFTSCLTTPIKIALRWFCMQKSAKLVPGVTLDLIEK
IPGRLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIM
RSYNCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRQSPFFGEQLTAFQ
VWLTMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVL
KLLQSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADPYMPAEHRTMAVF
ILAVIVNNYNTGQEACLQGNLIAICLEQLSDPHPLLRQWVAICLGRIWHNFDSARWCGVR
DSAHEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLINDGSP
VVRKELVVALSHLVVQYESNFCTVALQFMEEEKNYAAPSPANTTEAGNVTPVRERDSPAV
PRLRSVNSYTNIRAASSARNLNKSLQNLNLNEEGGPVTFSPGNLSASSSASSTLGSPDND
EFLLSFETIDKMRRVSSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPFPEVSDLAMKVLN
SIAYKATMNARPQKILDSGSLTQSAPASPTSKGTLIHQAGGSPPIPGVSSSSLTNDVPKP
PQAPPTRPPYTPTLGSQAPPHSHQFSRTRKMFDKGPDQMAEDGDETPAHRNFLSVTLQTG
LCEWSAKYFAQPVMKIPEEHDVESQVRKEREWRFLRNAGVRRQSQRITKRGITRLDDQIF
INRNPGVPSVVKFHPFNPCIAVADKDSICFWDWEKGERLDYFYNGNPRYTRITAMEYLNG
HDCSLLLTATDDGALRIWKNFADQRNPEMVTAWQGLSDMLPTTRVCGKAFWNCSVSRDSR
ENPGCSGLARRVSIYLDRSKQGGAGMVVDWEQENGLLMTSGDVRVIRIWDTEREMKVQDI
PTGADSCVTSVSCDPQRSLVVAGLGDGSVRVYDRRMAPNECRVMTYREHGAWVVKAHLQR
ETDGHIISVSVNGDVRFFDPRLPDSINVLQTVKGLTALDIHPQANLFACGSMNQFIALYN
SSGDVISNIKYYDGFMGQRIGAISCLAFHPYWPHLAVGSNDYYMSIYSTDKRLR
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggacacggagctgctccactcgcctgccgtggcgctgtcagaggaagacgag
gccgatatgagtgactggaaccttcctctggccttcatgaagaaacggcacctagagaag
atcgagggttcaaaagcactcgcacagagctggaggatgaaggacaggatgaagacggtg
agtgttgcactcgttctctgcctgaatgttggagtcgaccctcctgacgtggtgaagacg
tcgccctgtgccaggctggagtgctggatagatcctctgtcgatgagtccgcagaaggcg
ctggagacgatcggagccaatctgcagaaacagtacgagaactggcaacccagggcgcgg
tataagcagagtttagaccccacggtggacgaggtgaagaagctgtgcacgtctctgagg
agaaacgctaaagaggaacgcgtcctgttccactacaacggacacggcgtcccccgtccc
accgtcaacggggagatctgggtctttaacaagaactacactcagtacatccctctgtcc
atctatgacctgcagacatggatggggagtccctccatctttgtgtacgactgctctaac
gccggcatcatcgtcaagtccttcaaacagtttgcactgcagagggagcaggagctggag
caggtggcggcgataaacccgaaccaccccctggctcagatgcccctccctccttccatg
aagaactgcatccagctagcagcttgtgaagctaacgagctcctccctatgaaccctgac
cttcctgctgacctcttcacctcctgcttgaccacgcccatcaaaattgccctgcgctgg
ttctgtatgcagaaaagtgctaagctggtgccaggagtcacactggacctgatcgagaag
atccctggccgtctgaatgacaggaggacgccgttaggagagctcaactggatctttacc
gccatcacagacaccatcgcttggaacgtgctacctagagatcttttccagaaactcttc
cgccaggatctgttggttgccagtctgttccggaactttctattggctgagaggatcatg
aggtcatacaactgcactccggtcagcagtccaaggttaccgcccacctacatgcacgcc
atgtggcaggcgtgggatctggccgtggatatctgcctctctcagcttcccaccatcatc
gaggagggcacggctttcaggcagagtccgttttttggcgagcagctcacggcgtttcag
gtgtggctcacgatgggggtggagaacagaaacccacctgagcagctccctattgtccta
caggtcctcctgagtcaggtgcacaggttgcgagcgttggacctgttgggtcgtttcctg
gatctcggaccctgggctgtcagcctggctctatcagtaggaatatttccatatgttttg
aagttgttacagagttcagcgcgagagcttcgtcctctcctcgtcttcatctgggctaaa
atccttgctgtggacagttcatgtcaggctgatctggtgaaggataacggtcataagtac
ttcctgtcagtgttggctgatccgtacatgccggccgagcaccgcaccatggccgtcttc
atcctggcagttattgtcaacaattacaacacaggacaggaggcgtgtctgcaggggaac
ctgatagcgatctgtctggagcagttaagcgatcctcatcccctcctgcgtcagtgggtc
gcgatctgcctcggccgcatctggcacaacttcgactctgctcgctggtgcggcgttcgg
gacagtgctcacgagaaactctacagcctcctgtcagaccccatccccgaggtgcgttgt
gcagccgtatttgcgttggggacttttgtggggaattcagcagaaaggacggatcattcc
accaccatcgatcacaatgtggctatgatgctcgcacaactcatcaacgacgggagcccc
gtggtcaggaaggagctggtggtggctctcagtcacctggtggttcagtacgagagcaac
ttttgcactgtcgctctgcagtttatggaggaggagaagaactatgcagcaccctcacct
gctaacactacagaggcggggaacgtgactccggtgagggagcgagacagtccggcggtt
cctcgtctccgctctgttaactcctacaccaacatccgagcggcgagcagcgcccgcaac
ctcaacaagagcctccagaacctcaacctcaacgaggaaggcgggcccgtgaccttctct
cccggtaatctgagtgccagcagcagtgccagcagcaccctcggcagccccgataatgac
gagttcctcctgtcctttgagaccattgataagatgagacgcgtcagctcatactcgtct
ctcaactcgctcatcggtgtgtcctttaacagcgtatacacacagatctggcgtgtgttg
ttacacctggcggctgatccgtttcctgaggtgtctgatttggccatgaaggtgctgaat
agcatcgcctataaggctacgatgaatgcacggccgcagaagattttggactcgggttct
ctcacgcaatctgcacccgccagtccaaccagcaagggaacactcatacaccaagctggc
gggtctccacctatcccgggcgtgtccagttccagcctcaccaacgacgtgccaaaacca
ccacaagccccgcccactcgccctccgtacacacccactttaggctctcaggctccgcct
cattcgcaccaattctcacgaacacgcaaaatgttcgacaagggacccgaccagatggca
gaggatggggatgagactcccgctcacaggaactttctcagtgtgactcttcagaccgga
ctgtgtgaatggagcgccaaatacttcgcacaacccgtcatgaagatcccggaggagcac
gatgtggagagtcaggtgaggaaggagagagagtggaggttcctgaggaacgctggagtg
cgccgccagagccagcgtatcacaaagagaggaatcacccgattggacgatcagatcttc
atcaacaggaaccctggagtgccctcggtggtgaagttccacccgtttaacccctgcatc
gccgtcgccgacaaagactccatctgtttttgggactgggagaaaggagagaggttggat
tacttctataatgggaatcccagatacactcgcatcacagcgatggagtacctgaacgga
cacgactgctccctccttctcaccgccacggatgacggggcgttacggatctggaagaac
tttgcagaccagcgcaaccccgaaatggtgacggcatggcagggtctctcagacatgctg
cccaccacacgagtgtgtggaaaagcgttttggaattgcagcgtgagtcgggactctaga
gaaaaccccggctgctcgggtttagctcggcgagtttcaatctatcttgacagaagtaag
cagggaggtgcaggaatggtggttgactgggaacaagagaacggtctcctcatgacctct
ggagatgtgcgagtcatccggatctgggacacagagagagagatgaaagtccaggacatc
ccgacaggtgcagacagctgtgtgacgagtgtgtcatgtgacccgcagcgttccctagtg
gtggccggtctcggagacggatcggtgcgtgtgtatgatcgtaggatggcacccaatgag
tgtcgtgtgatgacgtatcgggagcacggcgcgtgggtggtgaaggctcacctgcagaga
gagacagacggacacatcatcagtgttagtgtaaatggagatgtgcggttcttcgacccc
cggttgcccgactccatcaacgtcctgcagacggtgaagggactgacggctctcgacatc
caccctcaagccaacctgtttgcctgtggttctatgaatcagttcatcgctttgtataac
tccagcggtgatgtcatcagtaatattaaatactatgacgggttcatggggcagaggatc
ggtgctatcagctgcttagcgttccacccatactggccgcacttggccgtgggcagcaac
gactactacatgtccatctactcgacggacaagagactgagataa
DBGET
integrated database retrieval system
