Silurus meridionalis (southern catfish): 124378194
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Entry
124378194 CDS
T08004
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124378194 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124378194 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124378194 (tra2b)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124378194 (tra2b)
Spliceosome [BR:
smeo03041
]
Common components
Common spliceosomal components
SR proteins
124378194 (tra2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
124378194
NCBI-ProteinID:
XP_046693690
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All DBs
Position
24:8832814..8839802
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AA seq
317 aa
AA seq
DB search
MSDTEKEFVVKESRSRSVSPRGSVKSTSNSPGRSKDGSHRSRSRSKSHSRSKSRSRSRSR
SHRSSRRRHSRSRSRRRHSRSRSYSREYRRSRSHSPMSNRRRHVGNRANPDPNCCLGVFG
LSLYTTERDLREVFSKYGPLSNVSIVYDQQSRRSRGFAFVYFENREDSKEAKEQANGMEL
DGRRIRVDYSITKRPHTPTPGIYMGRPTYGGGGGGGSGGGGGGGGGGSGGRPSTSSSRSR
DYYDRGYDRGYDRGYDRYDDREYYKSYRRRSPSPYYGRGGYRSRSRSRSYSPRMYNLCVC
VCVCVCGKNVCIYLFIR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccgagaaggagtttgtagtgaaagagtcccgatctcggagtgtgagtccc
agaggctcagtgaagtcaaccagcaactcgccgggaagatctaaggatggttcccaccgc
tccaggtctagatctaaatcccattccaggtcgaagtccaggtcccggtccaggtcccgg
tcccacaggagctctcggcgtcgtcattctcgctcgcgatctcgaaggcgtcactcacgc
agccgctcatacagccgcgagtaccgacgcagccgcagccactcgcccatgtccaatcgc
agacgtcatgttggtaaccgggcaaaccctgaccctaactgttgcctgggtgtgtttggc
ctgagcctgtacaccacagagcgagacctgagagaagtgttctccaaatacggccccctg
tccaacgtcagcatcgtgtacgaccagcagtctcgccgctcacgaggcttcgccttcgtc
tacttcgagaacagggaggattctaaggaggcgaaagagcaagctaacggcatggagctg
gatggccggcgtatcagggtggactattccatcaccaagagaccacacacccccacacct
gggatttacatgggccggcctacctatggaggtggtggtggtggtggcagtggcggtggt
ggtggtggtggaggaggaggtagtggaggaagacccagcacatcctccagtcgctccaga
gactattacgatcggggctatgaccgcggctacgatcgggggtatgaccgctatgatgat
cgggaatactacaaatcctacaggcgcagatctccttcaccttactacggtcgtggagga
tacagatcccggtcccgctcgcgctcctactctccacgtatgtacaacctgtgtgtgtgt
gtgtgtgtgtgtgtgtgtggaaaaaatgtatgtatttatttatttataagatga
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