Silurus meridionalis (southern catfish): 124378257
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Entry
124378257 CDS
T08004
Name
(RefSeq) procollagen galactosyltransferase 1-like isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00310
Lysine degradation
smeo00514
Other types of O-glycan biosynthesis
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124378257
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
124378257
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smeo01003
]
124378257
Enzymes [BR:
smeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
124378257
Glycosyltransferases [BR:
smeo01003
]
O-Glycan biosynthesis
O-linked Gal type
124378257
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GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
124378257
NCBI-ProteinID:
XP_046693783
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Position
24:1561105..1581738
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AA seq
591 aa
AA seq
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MHRGALLLSGAWALLVLGLSLGYFPEERWSPESPVLAPRVLLALVCRNSEHALPYVLGTI
DRLHYPKERIAVWVATDHNIDNTTFILREWLIKVQSLYHYVEWRPQEEPREYEDEDGPKH
WTDLRYEHVMKLRQAALDNARQMWADYFMLVDCDNLLTDPDVLWKLIKENKTIVAPMMES
RAAYSNFWCGMTSQGYYRRTPDYMPIRRGDRRDCFPVPMVHSTFLIDLRKQASTALAFWP
PHPDYTWSFDDVIVFAFSARMADVQMHLCNHEIYGHLPIPLHTRYSLRDEAENFLHTLLE
VMVRGSPVEPSKHLSVPPKHPDKLGFDEVFMINLLRRQDRRERMLRTLWEQEITCKIINA
VDGKALNESQVRALGITMLPGYKDPYHGRPLTKGELGCFLSHYNIWNEIVERGLQMSLVI
EDDLRFEIFFKRKLQKLMQDVKSEKLDWDLIYIGRKRMQVEEPEKPVPNIRNLVEADYSY
WTLGYMISLQGAKKLLRAEPLSKMLPVDEFLPVMYNKHPEEVYMSHYEVRDLLAFSTEPL
LIFPTHYTGDPGYISDTETSTVWDNETVHTDWDRDRSQKTRGMQSQATSDL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggggcgcgctgctgctctccggcgcctgggcgctgctcgtgctcggactgagt
ttgggttatttcccggaggagcgctggagccccgagtctccggttctcgctccccgcgtg
ctgctcgcgctggtgtgccgcaactcggagcacgcgctcccgtacgtcctcggtaccatc
gaccgcctgcactaccccaaagagcgcatcgctgtgtgggtggcgacggaccacaacata
gacaacacgaccttcattctgcgtgagtggctcattaaagtgcagagtctgtatcattat
gtggagtggagaccgcaggaggagcccagagagtatgaagatgaggatggcccaaagcac
tggaccgacctgcgttatgagcatgtgatgaagctacgacaggcggcgctggacaatgcg
aggcagatgtgggctgattactttatgttggtggactgtgataatctcctgacagaccct
gatgttctctggaagctgataaaggaaaataaaaccattgtggcaccaatgatggagtcc
agagctgcgtactctaacttctggtgtggaatgacctctcagggctactacagacgcaca
ccagactacatgcccataaggcgtggcgatagacgtgactgctttcctgtccccatggtt
cactccaccttcctgatagatctgaggaaacaggcatccacagctctggctttctggccc
cctcaccccgactacacctggtccttcgacgacgtcattgtcttcgccttctccgcccgc
atggcagatgttcagatgcacttgtgtaaccatgagatttacggtcacctccccatccca
ctgcatacccgctattccctgcgagatgaggcagagaacttcctgcacactctcctcgag
gtcatggttcgcggttctccggtggaaccctcaaagcatctctctgtccctcccaaacac
cctgataaactgggcttcgatgaggtgttcatgattaacctgctgaggcgtcaggatcgt
agagagcgaatgttgaggactctgtgggagcaggagatcacgtgcaagatcatcaacgca
gtggacggcaaggctctgaatgagagtcaggtacgagcgttggggatcaccatgttgccg
ggttacaaagatccgtatcacggcaggccgctgactaaaggagaactgggctgcttcttg
tcccactacaacatctggaatgagatagtagagcgaggactgcagatgtctctggttata
gaagatgatttgcgcttcgagattttctttaaaaggaaactgcagaaactgatgcaggat
gtgaagtcagaaaaacttgactgggatttaatatacatcgggaggaaaagaatgcaagtg
gaggagccggagaaaccggtccccaacatccgtaacctggtggaggccgactattcctac
tggacgctgggctacatgatctccttacaaggggccaaaaagctgctaagggcggagcct
ttaagcaaaatgcttcctgtggatgagttcctccccgtcatgtacaacaaacacccagag
gaggtctacatgtctcattatgaggtgagggatctcctggcgttctccaccgagccgtta
ctcatcttccccacgcactacacgggcgacccggggtacatcagcgacaccgagacgtcc
actgtgtgggacaacgagaccgtccacaccgactgggaccgagatcgctcgcaaaagacc
cgcggcatgcaatcgcaggctacctctgacctctga
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