KEGG   Silurus meridionalis (southern catfish): 124378261
Entry
124378261         CDS       T08004                                 
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
  KO
K08112  glypican 6
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:smeo00535]
    124378261 (gpc6a)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:smeo00537]
    124378261 (gpc6a)
Proteoglycans [BR:smeo00535]
 Cell surface proteoglycans
  Glypican family (GPI-anchored HSPG)
   124378261 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:smeo00537]
 Others
  124378261 (gpc6a)
SSDB
Motif
Pfam: Glypican Fz Serglycin
Other DBs
NCBI-GeneID: 124378261
NCBI-ProteinID: XP_046693788
LinkDB
Position
24:complement(18395524..18551499)
AA seq 587 aa
MVRLQVCVLALCAALCLCSGGRGAERDRERERMEDEEDADDGASRSCRDVQQALVERGFT
SIRINQHQTAGEHLRVCSQEYTCCGVEMEDLLAHRSKADLERLMEESSVTLRNVFTTKHR
KFDEFFLELLDNSEKSLNHMFVRTYGNLFIQNSEIFEDLFSELRRYYTGGNVNLEEMLGD
FWAKLLEKMLQLLNSQFSFTDEYFECVSKYTDQLKPFGDTPHKLKVQITRALAAARTFVQ
GLMVGREVANRVAKVNVSPGCSKALTRMFYCPYCGGFVDLKPCRSYCQNVMKGCLANQAD
LDPEWNVFIDSMLLVADRLKGPFNIEAVMEPIDSKISEAIMAMQAKSTQISAKVFNGCGP
PKPVRSGSGRNTREVFNARFKPYSLEDSPPTESTGIDKLRSVWRTMQDSVIDIKAKLKQA
KRFWTSLPDAICSKENVIEPNSDQCWNSHTKGRYFPEVVKDGLTNQLSNPEVAIDITRPD
TFIRQQIMALRVMTNKLRSAYNGNDISFQDSSDEVSGSGSGSGYNTEFEFTTTEVPAVGV
GRQDQATPLRPAPDKAPPLIPPSNKALPLLASPITLLSVTLLQFWWR
NT seq 1764 nt   +upstreamnt  +downstreamnt
atggtgaggctgcaggtgtgtgtgttggctctgtgcgcggcgctctgcctgtgctcggga
ggacgcggcgccgagcgcgaccgggaacgcgagcgcatggaggatgaggaggacgccgat
gatggagcatcgcggagctgcagggatgtccagcaggcgctggtcgagcggggcttcacc
tccatcaggatcaaccagcaccagactgcaggtgagcacctacgtgtgtgttctcaggag
tacacgtgctgcggggtggagatggaggacctactcgcgcatcgcagtaaagccgatctc
gaacgactaatggaggagagcagtgtcaccctgaggaacgtcttcaccaccaaacacagg
aagtttgacgagttcttcctggagttgctggacaactcggagaagtctctgaaccacatg
tttgtccgcacctacggcaacctgtttatacagaactcggagatcttcgaggacctgttc
tctgagctacggcgctactacacgggaggcaatgtgaacctggaggagatgctgggtgac
ttctgggccaagcttctggagaagatgttgcagctgttgaactcgcagttttctttcaca
gacgagtatttcgaatgtgtgagcaagtacacggaccagctgaagccgttcggggacaca
ccgcacaaactaaaggtccagatcacacgtgccctcgccgccgcacgcaccttcgtccag
gggctcatggtgggacgtgaggtagccaatcgtgtagctaaggtgaacgtgtcccccggc
tgcagtaaggctctgacgcggatgttctactgtccatactgcggcggctttgtggacctg
aagccctgcaggagttactgtcagaacgtcatgaagggctgcctcgctaatcaagccgac
ctggaccccgagtggaacgtcttcatcgactccatgctcctggtagctgataggttaaag
gggccatttaacatcgaggccgtgatggagccgattgactccaagatctccgaggccatc
atggccatgcaggcaaaaagcacacaaatctctgccaaggtgtttaacggctgtggtcct
cccaaaccggttcgttctggatcgggtcggaacacacgcgaggtgtttaatgctcgcttc
aaaccatacagcctagaagactcgcctccgactgagagcactggcatcgataaactgagg
agcgtctggagaacaatgcaggacagcgtgattgacattaaggcgaaattgaagcaggcg
aagaggttctggacatcacttcctgatgcaatctgttctaaagagaatgtgatcgaacca
aacagtgaccagtgctggaacagtcacactaaaggaaggtatttccctgaggttgtcaaa
gacggcctgaccaatcagctgagtaatccagaggtggccattgacatcactcggccagac
accttcatccggcagcagatcatggctctgagagtgatgaccaacaaactgcgcagcgct
tacaacggcaatgacatctccttccaggactccagtgatgaggtcagcggttctggcagc
ggaagcggatacaacaccgagttcgagttcacaaccacggaggtaccagcagtaggggtg
gggcgtcaagaccaggccacgcctctacgaccggcacccgataaagccccgcctcttata
cctccttccaacaaggccctgccccttctcgcctcacccatcactttattgtcagtcacg
ttgctgcaattctggtggagataa

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