Silurus meridionalis (southern catfish): 124378261
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Entry
124378261 CDS
T08004
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
smeo00535
]
124378261 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smeo00537
]
124378261 (gpc6a)
Proteoglycans [BR:
smeo00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
124378261 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smeo00537
]
Others
124378261 (gpc6a)
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Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
Serglycin
Motif
Other DBs
NCBI-GeneID:
124378261
NCBI-ProteinID:
XP_046693788
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Position
24:complement(18395524..18551499)
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AA seq
587 aa
AA seq
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MVRLQVCVLALCAALCLCSGGRGAERDRERERMEDEEDADDGASRSCRDVQQALVERGFT
SIRINQHQTAGEHLRVCSQEYTCCGVEMEDLLAHRSKADLERLMEESSVTLRNVFTTKHR
KFDEFFLELLDNSEKSLNHMFVRTYGNLFIQNSEIFEDLFSELRRYYTGGNVNLEEMLGD
FWAKLLEKMLQLLNSQFSFTDEYFECVSKYTDQLKPFGDTPHKLKVQITRALAAARTFVQ
GLMVGREVANRVAKVNVSPGCSKALTRMFYCPYCGGFVDLKPCRSYCQNVMKGCLANQAD
LDPEWNVFIDSMLLVADRLKGPFNIEAVMEPIDSKISEAIMAMQAKSTQISAKVFNGCGP
PKPVRSGSGRNTREVFNARFKPYSLEDSPPTESTGIDKLRSVWRTMQDSVIDIKAKLKQA
KRFWTSLPDAICSKENVIEPNSDQCWNSHTKGRYFPEVVKDGLTNQLSNPEVAIDITRPD
TFIRQQIMALRVMTNKLRSAYNGNDISFQDSSDEVSGSGSGSGYNTEFEFTTTEVPAVGV
GRQDQATPLRPAPDKAPPLIPPSNKALPLLASPITLLSVTLLQFWWR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggctgcaggtgtgtgtgttggctctgtgcgcggcgctctgcctgtgctcggga
ggacgcggcgccgagcgcgaccgggaacgcgagcgcatggaggatgaggaggacgccgat
gatggagcatcgcggagctgcagggatgtccagcaggcgctggtcgagcggggcttcacc
tccatcaggatcaaccagcaccagactgcaggtgagcacctacgtgtgtgttctcaggag
tacacgtgctgcggggtggagatggaggacctactcgcgcatcgcagtaaagccgatctc
gaacgactaatggaggagagcagtgtcaccctgaggaacgtcttcaccaccaaacacagg
aagtttgacgagttcttcctggagttgctggacaactcggagaagtctctgaaccacatg
tttgtccgcacctacggcaacctgtttatacagaactcggagatcttcgaggacctgttc
tctgagctacggcgctactacacgggaggcaatgtgaacctggaggagatgctgggtgac
ttctgggccaagcttctggagaagatgttgcagctgttgaactcgcagttttctttcaca
gacgagtatttcgaatgtgtgagcaagtacacggaccagctgaagccgttcggggacaca
ccgcacaaactaaaggtccagatcacacgtgccctcgccgccgcacgcaccttcgtccag
gggctcatggtgggacgtgaggtagccaatcgtgtagctaaggtgaacgtgtcccccggc
tgcagtaaggctctgacgcggatgttctactgtccatactgcggcggctttgtggacctg
aagccctgcaggagttactgtcagaacgtcatgaagggctgcctcgctaatcaagccgac
ctggaccccgagtggaacgtcttcatcgactccatgctcctggtagctgataggttaaag
gggccatttaacatcgaggccgtgatggagccgattgactccaagatctccgaggccatc
atggccatgcaggcaaaaagcacacaaatctctgccaaggtgtttaacggctgtggtcct
cccaaaccggttcgttctggatcgggtcggaacacacgcgaggtgtttaatgctcgcttc
aaaccatacagcctagaagactcgcctccgactgagagcactggcatcgataaactgagg
agcgtctggagaacaatgcaggacagcgtgattgacattaaggcgaaattgaagcaggcg
aagaggttctggacatcacttcctgatgcaatctgttctaaagagaatgtgatcgaacca
aacagtgaccagtgctggaacagtcacactaaaggaaggtatttccctgaggttgtcaaa
gacggcctgaccaatcagctgagtaatccagaggtggccattgacatcactcggccagac
accttcatccggcagcagatcatggctctgagagtgatgaccaacaaactgcgcagcgct
tacaacggcaatgacatctccttccaggactccagtgatgaggtcagcggttctggcagc
ggaagcggatacaacaccgagttcgagttcacaaccacggaggtaccagcagtaggggtg
gggcgtcaagaccaggccacgcctctacgaccggcacccgataaagccccgcctcttata
cctccttccaacaaggccctgccccttctcgcctcacccatcactttattgtcagtcacg
ttgctgcaattctggtggagataa
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