Silurus meridionalis (southern catfish): 124378291
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Entry
124378291 CDS
T08004
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124378291
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRNT
LRR_LRWD1
Hepsin-SRCR
Motif
Other DBs
NCBI-GeneID:
124378291
NCBI-ProteinID:
XP_046693829
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Position
24:17658853..17786496
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AA seq
869 aa
AA seq
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MKMRVWILTLILLLAASLSLVEMYDNYGEICRNLCTCEEKEGVLTVSCENRGIVRLSEIS
PVNFPTYHLLLTGNLLKKLSVNDFINYTGVTILHLGNNDISEMETGAFNGLQGLRRLHVN
NNKIDVLRDDTFTGLENLEYLQIDYNFISIIEPSALSRLHHLTVLILNDNLLSSLPTNIF
RNVPLTHLDLRGNRLKMFPYIGLLEHMDKVVELQLEENPWNCSCELISLKAWLESIAYTA
LVGEVVCETPFRLHGRDLDEVSKQELCPRRAISEYEMRPPPPLSTNGYFQTTPVAVTSSA
TSSAVLRSSSRPTKGTRQSNKTRSKPTSRIPGNPYNYGPIIAFQTKSPVPLDCPTACTCN
LQISDLGLNVNCQERKIESISDLKPKPYNPKKMYLTGNYIPVVRRSDFVEAEGLDLLHLG
NNRISLIHDRAFGDLINLRRLYLNGNLIDKLTADMFFGLQNLQYLYLEYNKINEVVAGSF
RFVPNLQLLFLNNNLLKTLPGGVFSSMSLSRLNLRNNHFQNLPVSGVLDQLKALVQVDLF
ENPWDCTCDVVGMKIWLEQLNSGTVVNDVVCVTPKRLAGQDMRSLLSEQLCPDYSDIVVS
TVAPSEATLETKVVTTETPLRFNPPSSTVPLSVLILSLLLVFIMSVFVAAGLFVVVMKRR
KKSQSDRTSTNNSDVSSFNLQYSLYSNRSVPKVKHPAGHVYEYIPHTLGNMCKNPIYRSR
EGTAVEDYPDLHELKVGYRNPNQEERDPASRSPTYTVSTIEPREEPSTAQDAEHFFRGIL
EPDKTPNSAGNRYDYKYPSPGSYTYNPNFDVRRQFLHPEGIRETMLYNSAPSTVFVEPNR
NEYLELKAKLQMEPDYLEVLEKQTTFSQF
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcgtgtctggatactgacactaatcttgctgcttgccgcttctctgagcctg
gttgagatgtatgacaattatggggagatctgtaggaatttgtgcacttgcgaggaaaaa
gagggcgtcctgacggtcagctgcgaaaaccggggcatcgtgagactgtcggagatcagc
ccggttaatttccccacctatcaccttctcctgacggggaacttgctgaaaaaattgtcc
gtcaatgacttcatcaactacaccggagtcaccattttgcatttaggcaacaacgacata
tcggaaatggagaccggagcttttaatggactgcagggattaaggcggttgcacgtgaac
aacaacaaaatagatgttcttagggatgatacgttcactggattagaaaacctggaatac
cttcagattgattacaattttattagtattattgaacccagtgctctcagcaggctccac
catctgactgtgctcattttgaatgacaatcttttgtcatcgctgcctactaacattttc
cgaaatgtgcccttgacccacttggatctcaggggcaaccgcttgaaaatgttcccttac
attggccttttggagcatatggacaaagtggtggaattacagctagaggagaatccctgg
aattgttcttgcgaacttatctcgctaaaagcgtggctggaaagcatcgcctatacagcg
ctagttggcgaggtggtctgcgagactccgtttcgcctgcacggccgcgatctcgacgag
gtctccaagcaggagctttgccctcgtagggccatttcggaatatgagatgcgcccgccg
ccacctcttagtacaaacggatattttcagacgacaccagtggcagtgacttcctctgct
acatcctcagcagtgctgaggtcctcatcccgacctaccaaaggcactcggcagtccaac
aagaccaggtccaagcccacttctcgcatcccgggcaatccctacaactatgggccaatc
atagcttttcagaccaaatctcccgtgcctttggattgccccacggcatgcacgtgcaac
cttcagatctcggatcttgggctcaacgtcaactgccaggaaaggaaaatcgagagcata
tcggatctaaagcccaagccgtataatcccaaaaagatgtacctcactggaaattacatc
cctgttgtgcgccgatcggatttcgtcgaggcggagggattggatttgttgcacttgggg
aacaatcggatatcactcatacatgaccgggcatttggggatttaatcaacctgcgcagg
ttgtacttgaatggcaatttgattgacaagctcaccgcagacatgttctttgggctccag
aaccttcagtacttgtatttagagtacaacaaaatcaatgaggtagttgcaggtagcttt
cgtttcgtgccaaacctccagctgcttttcctgaacaacaatcttcttaagaccttgccg
ggaggcgtcttttctagcatgtccctctcaaggctcaatctacgcaacaaccactttcaa
aacttacctgtcagcggtgtcctcgatcaactcaaggctttggtgcaagtggatcttttt
gaaaacccatgggattgcacgtgtgatgtagtaggcatgaaaatatggctggagcagctc
aactctggaactgtggttaacgatgtcgtgtgcgtgactccaaagagacttgcagggcaa
gatatgcgcagcctcctttcggaacaactgtgcccagattattcggatattgttgtgtcg
acagtagctccttcagaagccaccttggaaacgaaggtagtcaccacggagactcctttg
aggtttaaccctccttcaagcaccgttccattgtcagtccttatccttagcctcctcctg
gtcttcataatgtctgttttcgtggctgctgggctgttcgttgtggtcatgaaacggcgg
aaaaagtcccaaagcgaccgcaccagcaccaacaactcggatgtaagctcctttaacctc
cagtacagtctttatagcaatcgctcggtccccaaagtcaaacacccagcaggccatgtc
tatgagtacatcccccatactcttgggaacatgtgcaagaaccccatttataggtccaga
gaaggtactgctgtggaggattatcctgatctgcatgagctgaaggttggctaccgaaac
cccaaccaggaagagcgggacccagcgtcaaggagtcccacatacactgttagtaccatc
gaacctcgggaggaaccttcgaccgctcaggatgccgagcatttcttccgagggatctta
gagccagacaagactccaaacagtgccggaaatagatacgattacaagtaccccagtcct
ggatcttacacgtacaacccaaatttcgatgtacggaggcaattcttgcatcccgaggga
attagagaaactatgctgtacaattccgctccaagtactgtcttcgtggagccaaaccgc
aacgaatatttggaactaaaggcgaaactccaaatggagccggattacctcgaagttctt
gagaaacagacaacatttagccagttttaa
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