Silurus meridionalis (southern catfish): 124378332
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Entry
124378332 CDS
T08004
Name
(RefSeq) complement C3-like
KO
K03990
complement component 3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04145
Phagosome
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124378332
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124378332
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124378332
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124378332
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124378332
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124378332
Peptidases and inhibitors [BR:
smeo01002
]
Peptidase inhibitors
Family I39: alpha2M family
124378332
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Phagocytosis
Opsonins
124378332
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
124378332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TED_complement
A2M_BRD
A2M_recep
A2M
MG4
MG1
NTR
MG3
MG2
ANATO
C3_CUB2
B9-C2
Transglut_C
Arrestin_C
Phage_tail_terminator_4
Msg2_C
Motif
Other DBs
NCBI-GeneID:
124378332
NCBI-ProteinID:
XP_046693883
LinkDB
All DBs
Position
24:2996608..3055921
Genome browser
AA seq
1636 aa
AA seq
DB search
MLVDVVWLTATLLSFPLLTLCEPLFIMSTSQILKMETEQKVFVEVQDYGGSDTLSININV
MNFPSKQSSLVSKSIDLNLNNKYQANVDIKIPFINTVFKADSEEQQYVYLRAVWGSQTLE
KIVMVSFQPGYLFLQTDKTIYTPDTDVKYRIFSMNSFMKPMDNTVVVKVSTPEGIIVEQK
SISVKKGVVTDIFKLGNPVRNGIWKIAAHFKENSYKNFTAEFEVKEYRLPSFDVSLTTDK
SFFYADDESFSVQIKAKYLFGENVEGSAFVVFGVFQGNEKKSIQSSLDRVDIKKGEGRAN
LTRQQIIQTFPDILKLVGETLYISVSVLTNTGSEMVEAERRGIHIVTSPFTIQFTKTPRY
FKPGMPFNFKVYVTNPDGTPAENINLLVSHEDKAGKTDLNGLASFHLNTKPSDTELKIKV
ETNEESLKGRVGSQAVNTFTAYTYKSSSKNYLHITLTTPVINVDSPSSFTLNIQTPSEDK
IQDITYMILSKGQIVHTSKIKREKNNVITENIVITRQMLPSFRLLAYYHVGTTEVVADSI
LVDVKDTCNEQVHLNIQDPQPVYLPADQINLQVTAAPSASVYLVAVDKGVYVLNNKNRIT
QTKIWDIVEQHDIGCTAGSGKDAMGVFYDAGLLFITQTAGSTAERRVTTCAPDSKRKRRA
ITKSELISTLVSKYNDKLKKCCRDGLVENLLGYTCGRRAEYIEGEVECRQAFLHCCQRLA
DVRKAAVQEELHFARSEEKEANEMSDEITSRSVFPEIWMWDKEDIPSGTNVKIRDVTLPE
SITTWVLTAVSISQEGICVANPFELIVKKNFFIDLKLPYSTSVNEQIEIKVVIHNLNNKP
MKKVYVELKETEDICSMASFKEKYRTTVSVDKQSSNAVSFVIIPLKAGNHKIEVKAFDLV
SQVTDGVAKDLKVVTQGILTYTGEVTLILEPDKHGGRQRSDISRPFLKNQMPDTDAHTYI
AVRGRPLSQMIEEAISGRGLETLIKQPSGCGEQNLMAMVLPLIATHYLDKTNQWSDVGVD
KRVEALGYISTGIQTELTYQQDDHSFGMWPVSKGSTWLTAYVVKMFSLADELVTVNHKVI
CDAAEWLVTKTKSPEGMFTEVSSIGSSSMGGKSSGLTMTAFVLMALQEASRLCENNVPNY
QQHLRSAANYIARNIDSTTDTYAVAMASYALARDGQLDTDHLFRFASSDRSNWPVKEGYF
FTLEATGYALLALLETRDYEKAKPIADWLRRNQALGSGYRSTQATAVVFQAVAKYMTDKP
KTKEGTMTVIVSSTARSTAFKGSFSKTDKNLQRSDKFLANGDLTVTASGQGEGSISVATL
YYTKPGENYTKCNKFDLEVKMTRDKTASYPGALASYTLTIETRFLHETKEAAMTILDISL
LTGFVADKDDLKKLMGVDKYINDFELNSQLSEKASVIIYLKKVSNKVKEKIAFKIHMMLK
VGVSQPAAVSVYEYYNIENHCVKFYDPHMSQSSGSLYLICPKEVCSCAEANCPQLKGPAV
PDEKLRIKEACHNKDFIYKATLEVVTRERSSDIYTFTIVRVIKEGTDKNVLNDPRDFYIH
IACKDKLGLKEGKDYLIMGPEPKKIQDSWHYTIRTSSWLEYWPTQEESQDNKNNDGLRYI
GLSSLSNLLENEGCTT
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtggacgtggtgtggttgacggcaacattgctctcctttccattgctcacacta
tgtgaaccactgttcatcatgtcaacttcccagattctgaaaatggaaacagaacagaag
gtgtttgtagaggtgcaagactatggaggcagtgacactttaagcatcaatataaatgta
atgaacttccctagtaaacaatctagcctcgtcagtaaatccatcgatctaaatctgaac
aacaaatatcaagctaatgttgatataaagattccttttataaacactgtgtttaaagcc
gactctgaggaacaacagtatgtttatttgagagcagtttggggtagccaaacattggag
aagattgttatggtctcattccagcctgggtatttgttccttcagacagataagacgata
tatactccagataccgatgttaaatacagaatattttctatgaactcattcatgaagcct
atggacaatactgtagttgtgaaagtatcaactccggaagggattattgttgaacaaaaa
tcaatcagtgtaaaaaagggagtagtcactgatatttttaaactgggaaatcccgtcaga
aatggaatctggaaaatagcagcacactttaaggagaattcttataagaattttacagca
gagttcgaggtcaaagaatacagactgcccagttttgatgtgagtttgacaactgacaaa
tctttcttctatgctgatgatgaaagtttttctgtccagatcaaggcaaagtatctgttt
ggtgaaaatgttgaaggtagtgcttttgttgtgttcggagtgtttcaaggaaatgaaaaa
aaaagtattcaaagctctctggacagggttgatatcaagaaaggagaaggtagagcaaat
ctaaccagacaacagatcattcaaacctttccagacatacttaaactggttggagaaaca
ctgtacatatctgtcagtgtgctcacaaatactggcagtgagatggtggaagctgagagg
aggggtatacatatagtcacatcgccattcaccatccagttcaccaaaacccccagatat
ttcaaacctggaatgccgttcaattttaaggtgtacgtgacaaaccctgatgggacacca
gcagaaaacatcaacttgctggtgtctcacgaagacaaagctggaaaaacggatttaaac
ggcttagcttcgttccacttaaacaccaaaccctcagatactgagctgaagatcaaagta
gaaacgaacgaggagagccttaaaggcagggtgggaagtcaagcagttaacacattcaca
gcctacacctacaaatccagctccaaaaactacctgcacatcaccttaactacaccagtg
ataaatgtcgacagtccaagcagtttcacgctaaatatacagacgccttcagaagataaa
attcaagatattacttacatgatcttaagtaaagggcagattgtgcacacttcgaagata
aagagagaaaaaaataatgtgataactgaaaatatagttatcaccagacaaatgcttcct
tcattccgactgctggcgtattaccatgtaggaactacagaggttgttgctgactccatt
ttggttgatgtgaaggacacatgtaacgaacaggttcatctgaatatacaagatcctcaa
ccagtgtatttacctgctgatcaaatcaatttacaagttactgctgctcctagtgcaagt
gtttatctggttgctgtggataaaggcgtctacgttctcaataacaagaacagaatcact
cagaccaaaatctgggacattgtagaacagcatgacatcggctgtacagctggaagtggg
aaagatgctatgggtgttttctatgatgcaggcctgctgttcataacacagaccgcagga
agcactgccgagcgaagagtcaccacctgtgcacctgactcgaaaagaaagcggcgtgcc
atcaccaaatcggagctcataagcactttagtgagcaagtacaatgataagctaaagaag
tgttgcagggacggattggtggaaaaccttctgggttatacatgcgggcgaagagctgaa
tacatcgagggtgaagttgaatgccgccaagccttcttgcattgttgccagagacttgct
gatgtaagaaaagcagctgtgcaggaggaactgcactttgccagaagtgaagagaaagag
gcaaatgagatgtctgatgaaattacatcacgttcagtcttccctgaaatctggatgtgg
gacaaagaggatattcccagtggtactaatgtgaaaattcgagatgttaccctaccagaa
tccatcaccacctgggtgctcactgctgtcagtatttcacaggaaggtatttgtgtggca
aatccatttgagctgatagttaagaagaacttctttattgatctgaaattaccgtactct
acctcagtcaacgaacaaatagagatcaaagtggttatccataacttaaacaacaagccc
atgaaaaaggtctatgtggagctgaaggagacagaagatatatgcagcatggccagcttt
aaggagaagtatcgcacaactgtcagcgttgataaacaatcgtccaatgcggtttctttt
gtcattattcctcttaaggcaggaaaccacaaaatcgaggtgaaggcctttgatctagta
tcacaagtgacagacggagtggcgaaagatttaaaagtagtgactcagggcattttgacg
tatacaggagaggtcactttaatattagagcctgacaagcacggaggacggcagcgatcg
gatattagtaggccattcctgaagaaccaaatgccagacacagatgctcacacctacata
gctgttagaggcaggcctttgtcgcagatgattgaggaagcaatcagtggtagaggtcta
gaaacccttattaaacagccatcaggctgtggagagcaaaacctgatggccatggtcctg
cctctaatcgcaacacattacctggacaaaaccaaccagtggagtgatgtgggggtggac
aaacgtgtcgaagcgctcggttacatcagtacaggcattcagacggagcttacatatcaa
caggacgatcattcctttggcatgtggccagtctcaaaaggcagcacatggctaactgcg
tacgtggtgaaaatgttcagtctggcggatgaattggtcaccgtaaaccataaagtcatt
tgtgatgctgccgagtggctggttactaaaacaaagtctcctgaagggatgttcactgaa
gtgtccagcattggctccagctctatgggcggcaaaagttccggtctaaccatgactgca
tttgtactgatggcattacaggaagcgagtcgactttgtgaaaacaacgtacctaattac
caacagcacctgcgcagtgcagcaaactacattgcaaggaacattgattcgacaacggac
acatatgctgtggccatggcttcctatgctctggcaagagatggccagctggataccgac
catttgtttagatttgcttcatccgaccggagcaactggcctgtaaaagagggttatttt
ttcaccctggaagcaaccggatatgctctcctggccctgctggagactcgagattatgag
aaggccaaacccattgcagattggctgaggaggaatcaagcattaggaagcggatatcgc
tccacccaggctaccgccgtggtgtttcaagctgtagctaagtacatgactgacaaacct
aaaaccaaagaggggaccatgaccgtcattgtcagttccactgcaagaagtacagcgttt
aaaggctcattctccaaaactgataaaaatctacaacgctcagacaagttcttggcaaat
ggagatctaacagtaacagcgtctggccaaggggaaggctccatatcggttgccactttg
tattacaccaaacctggtgaaaattatacaaagtgtaacaaatttgatctggaggttaaa
atgaccagagacaaaacagcttcctaccccggtgcccttgcaagttatacactcaccata
gagactaggttcctgcatgaaacaaaagaggctgctatgactatcctggacatcagcctg
ctgacaggatttgtagcagacaaagatgacctgaaaaagctgatgggtgtggacaagtac
attaatgattttgagctgaacagccagctttcagaaaaagcatccgtcatcatctacctg
aaaaaggtctcaaataaagtgaaagagaagattgctttcaaaattcacatgatgctgaag
gttggtgtcagtcagcctgctgcagtgtctgtgtatgagtattacaacatagagaaccac
tgtgtgaagttttatgacccgcacatgtctcagtcaagcggctccctctacctcatctgt
cctaaagaagtgtgcagctgtgctgaggcaaattgtcctcagctgaaggggcctgcagtc
ccagatgaaaagttacgcattaaagaagcctgccacaacaaggacttcatttataaggca
actctggaagtggtgacaagagaacgctcatcagacatctataccttcaccatagtacga
gttattaaagaagggaccgataagaacgtgctgaatgatcctcgagacttttacattcac
attgcctgcaaagacaagcttgggttgaaggaaggcaaggactatctcatcatgggtcct
gagccaaagaaaatacaagacagttggcactacacgatcagaacgagcagttggttggag
tactggcccacgcaggaggagagtcaagataacaagaacaatgatgggcttagatacatc
ggactgagcagcttaagcaacctcctggaaaatgagggatgcaccacttaa
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integrated database retrieval system
