Silurus meridionalis (southern catfish): 124378334
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Entry
124378334 CDS
T08004
Name
(RefSeq) complement C3-like
KO
K03990
complement component 3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04145
Phagosome
smeo04518
Integrin signaling
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124378334
04518 Integrin signaling
124378334
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124378334
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124378334
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124378334
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124378334
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124378334
Peptidases and inhibitors [BR:
smeo01002
]
Peptidase inhibitors
Family I39: alpha2M family
124378334
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Phagocytosis
Opsonins
124378334
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
124378334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TED_complement
A2M
A2M_BRD
A2M_recep
MG1
MG4
NTR
MG2
MG3
ANATO
C3_CUB2
BatD
Ig_TRAPPC9-Trs120_4th
DUF7881_C
Transglut_C
Motif
Other DBs
NCBI-GeneID:
124378334
NCBI-ProteinID:
XP_046693886
LinkDB
All DBs
Position
24:3103718..3192193
Genome browser
AA seq
1635 aa
AA seq
DB search
MMLVDLVWLTATLLSFPLLTLCEPLFIMSTSQILKLGTEQKVFVEVQDYEGSDELSVNIN
VFNFPSKQFILVRETATLNQDNKYQANVDIKIPFIDTAFKVDSEEQQYVYLRAVWGNQTL
EKIVMVSFQPGYLFLQTDKTIYTPDSNVKYRIFAVNSVMKPLDNTIVVKVSTPEGIIVEQ
TSITVQKGVTKSSEFKLGNPVRNGIWKITANFKENSYKNFTAEFEVKEYRLPSFDVSLET
DKSFFYADDESFSVKIKAKYLFGENVKGSAFVVFGVFQGNEKKSIQSSLDRVNIREGEGT
ATLTRQQIIQTFPDIPKLVGETLYISVSVLTNTGSEMVEAERRGIHIVTSPYTIQFTKTP
RYFKPGMPFIFKVFVTNPDGTPAENIDLLVSHINNTARTDLNGIAQISLNTKSSDTELKI
EVQTDVESLKGRAGSQAVNTFTAHAYNSSSKNYLHITLTSAVNVERLSSFTLTIQTPPEN
KIQDITYMILSKGQIVHTSKKKREKNNVITENIVITRQMLPSFRLLAYYHVGTTEVVADS
IMVDVKDTCTEQVHLSIENQAAYKPFGHIKLKVTAAPSASVYLVAVDKGVYVLNNKNRIT
QTKIWDVVEQHDIGCTAGSGKDAMGVFYDAGLLFISQTAGSTAERRVTTCAPESKRKRRA
ITKSELISTLVSKYNDKIKKCCRDGLVENLLGYTCEQRAEYVEGEVECRQAFLHCCQRLA
DVRKAAVQEELHFARSEEKEANDWCDQITSRSVFPESWMWDKEEIPSGTTFTIRDVTLPD
SITTWVFTAVSISQEGICVANPYELMVRKDFFIDLKLPYSASVNEQIEIKVVIHNFNTNP
LKKVYVELKETEDICSMASFKGKYRTTVSVDKQSSNAVSFVIIPLKAGNYNIEVIAFELG
TQMTDGVKKVLKVVTQGILTYTGEVTLILEPDKHGGQQRSDISRPFLKNQMPDTDAHTYI
AVRGKPLSQMIEEAISGRGLETLIKQPSGCGEQNLMAMVLPLIATHYLDKTNQWSDVGVD
KRTEALGHIRTGIQTELAYQKDDRSFGMWPVSKGSTWLTAYVVKMFSLADELVAINHKVI
CDAAEWLVNKTMSPEGMFTEVSRIGSSSMGGKSSGLTMTAFVLMALQEASQLCENDVTNY
QQHLRSAANYIARNIDSTTDTYAVAMASYALARDGQLDTDRLFRFASSDRSHWPVKEGHF
FTLEATGYALLALLETRDYEKAKPIADWLRRNQALGSGYHSTQATAVVFQAVAKYMTDKP
KTKDGEMNVTVSSTARKTDFKGSFSKTYKNLQRSDKFLANGDLTVTASGHGEGSISVATL
YYTKPGENYTKCNKFDLEVKMTRHKTASYPGAIASFILTIETKFLHETKEAAMTILDISL
LTGFVADKDDLEKLMGVEKYIHDFELNSQLSEKASVIIYLKKVSNKVKEKIVFRVHMMLK
VGVIQPAGVSVYEYYNIENRCVKFYDPHMSQSSGSLNLICPKEVCSCAEANCPQLKGPAV
PDEKLRIEEACRNKDFIYKATLEVVTRERSSDIYTFTIVRVIKEGTDIKVLNEPRDFYIH
IACKDKLKLMEGKDYLIMGPEPTKIQDSWHYTIRTSSWLEYWPTQEESQDNNNNRDRYIG
LSRLSNLLENEGCTT
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttgtggacttggtgtggttgacggcaacattgctctcctttcctttgcttaca
ctatgtgaaccactgttcatcatgtcaacttcccagatcctgaaactgggcacagaacag
aaggtgtttgtagaggtgcaggactatgaaggcagtgacgagttaagcgtcaatataaac
gtatttaacttccctagtaaacaatttatcctcgtcagggaaaccgccactctaaatcag
gacaacaaatatcaagctaatgttgatataaagattccttttatagacactgcatttaaa
gtcgactcagaggaacaacagtatgtttatttgagagcagtttggggtaaccaaaccttg
gagaagattgttatggtttcattccagcctgggtatttgttccttcagacagataagacg
atatatactccagattccaatgtaaaatacagaatatttgctgtgaactcagtcatgaag
cctctggacaatactatagttgtgaaagtatcaactccggaagggattattgttgaacaa
acttcaatcactgtacaaaagggagtaaccaaatcaagtgaatttaaactgggaaatccc
gtcagaaatggaatctggaaaataacagcaaacttcaaggagaattcttataagaatttt
acagcagagttcgaggtcaaagaatacagactgcccagttttgatgtgagtttggaaact
gacaaatctttcttctatgctgatgatgaaagtttttctgtcaagatcaaggcaaagtat
ctgtttggtgaaaacgttaaaggtagtgcttttgttgtgttcggagtgtttcaaggaaat
gaaaaaaaaagtattcaaagctctctggacagggttaatatcagggaaggagaaggtaca
gcaacactaaccagacaacagatcattcaaacctttccagacatacctaaactggttgga
gaaacactgtacatatctgtcagtgtgctcacaaatactggcagtgagatggtggaagct
gagaggaggggtatacatatagtcacatcgccatacaccatccagttcaccaaaaccccc
agatatttcaaacctggaatgccgtttattttcaaagtgttcgtgacaaaccctgatggg
acaccggcggaaaacatcgacttgctggtgtctcacataaacaatactgccagaacggat
ttaaatggcatagctcagatctccttaaacaccaaatcctcagatactgagctgaagatt
gaagtacaaacggacgtggagagccttaaaggcagggcgggaagtcaagcagttaacacg
ttcacagcacatgcctacaattccagctccaaaaactacctgcacatcaccttaacttca
gcagtgaatgtcgaacgtctgagcagtttcacactgactatacagacgcctccagaaaat
aaaattcaagatattacttacatgatcttaagtaaagggcagattgtgcacacttcgaag
aaaaagagagaaaaaaataatgtgataactgaaaatatagttatcaccagacaaatgctt
ccttcattccgactgctggcgtattaccatgtaggaactacagaggttgttgctgactcg
atcatggttgatgtgaaggacacatgtactgaacaggttcatctgagtatagaaaaccaa
gcagcatataaaccttttggtcatatcaagttaaaagttactgctgctcctagtgcaagt
gtttatctggttgctgtggataaaggcgtctacgttcttaataacaagaacagaatcact
cagaccaaaatctgggacgttgtagaacagcatgacatcggctgtacagctggaagtggg
aaagatgctatgggggttttctatgatgcaggcctgctgttcatatcacagactgcagga
agcactgccgagcgaagagtcaccacctgtgcacctgaatcgaaaagaaagcggcgtgcc
atcaccaaatcggagctcataagcactttagtgagcaagtacaatgataagataaagaag
tgttgcagggacggattggtggaaaaccttctgggttatacatgcgagcaaagagctgaa
tacgtcgagggtgaagttgaatgccgccaagccttcttgcattgttgccagagacttgct
gatgtaagaaaagcagctgtgcaggaagaactgcactttgccagaagtgaagagaaagag
gcaaatgactggtgtgatcaaattacatcacgttcagtcttccctgaaagctggatgtgg
gacaaagaagagattcccagtggtactactttcacaattcgagatgttaccctaccagac
tccatcaccacctgggtgttcactgctgtcagtatttcacaggaaggtatttgtgtggca
aatccatacgagctgatggttaggaaggacttcttcattgatctgaaattgccttactct
gcctcagtcaatgaacaaatagaaatcaaagtggttatacataactttaacaccaacccg
ctaaaaaaggtctatgtggagctgaaggagacagaagatatatgcagcatggccagcttt
aaggggaagtatcgcacaactgtcagtgttgataaacaatcgtccaatgcggtttctttt
gtcattattcctcttaaggcaggaaactacaacatcgaggtgatagcctttgaactggga
acacaaatgacagacggtgtgaagaaagtgttgaaagtagtgactcagggcattttgacg
tacacaggagaggtcactttaatattagagcctgacaagcacggaggacagcagcgatcg
gatattagtaggccattcctgaagaaccaaatgccagacacagatgctcacacctatata
gctgttagaggcaagcctttgtcgcagatgattgaggaagcaatcagtggtaggggtcta
gaaaccctcattaaacagccatcaggctgtggagagcaaaacctgatggccatggtcctg
cctctaatcgcaacacattacctggacaaaaccaaccagtggagtgatgtgggggtggac
aaacgtaccgaagctctcggtcacatcaggacaggcattcagacggaacttgcatatcaa
aaggacgatcgttcctttggcatgtggccagtctcaaaaggcagcacatggctaactgcg
tacgtggtgaaaatgttcagtctggcggatgaattggtcgccataaaccataaagtcatt
tgtgatgccgccgagtggctggttaataaaacaatgtctcctgaagggatgttcactgaa
gtgtccaggattggctccagctctatgggcggcaaaagttccggtctaaccatgactgca
tttgtactgatggcattacaggaagcgagtcaactttgtgaaaacgacgtaactaattac
caacagcacctgcgcagtgcagcaaactacattgcaaggaacattgattcgacaacggac
acatatgctgtggccatggcttcctatgctctggcaagagatggccagctggatacagac
cgtttgtttagatttgcttcatctgaccggagccactggcctgtgaaagagggtcatttt
tttaccctggaagcaaccggatatgctctcctggccctgctggagactcgagattatgag
aaggccaaacccatcgcagattggctgaggaggaatcaagcattagggagcggatatcac
tccacccaggctaccgccgtggtgtttcaagctgtagctaagtacatgacagacaaacct
aagaccaaagatggggaaatgaacgtcactgtcagttccactgcaagaaagacagacttt
aaaggctcattctccaaaacttataaaaatctacaacgctcagacaagttcttggcaaat
ggagatctaacagtaacagcgtctgggcatggggaaggctccatatcggttgccactttg
tattacaccaaacctggtgaaaattatacaaagtgtaacaagtttgatctggaggttaaa
atgaccagacacaaaacagcttcctacccaggtgccattgcaagttttatactcaccata
gagacaaagttcctgcatgaaacaaaagaggctgctatgaccatcctggacatcagcctg
ctgacaggttttgtagcagacaaagatgacctggaaaagctgatgggtgtggaaaagtac
attcatgattttgagctgaacagccagctttcagaaaaagcatccgtcatcatctacctg
aaaaaggtctcaaataaagtaaaagagaagattgttttcagagttcacatgatgctgaag
gttggtgtcattcagcctgctggagtatctgtgtatgagtattacaacatagagaaccgg
tgtgtgaagttttatgacccgcacatgtctcagtcaagcggctccctcaacctcatctgt
cctaaagaagtgtgcagctgtgctgaggcaaattgtcctcagctgaaggggcctgcagtc
ccagatgaaaagttacgcattgaagaagcctgccgcaacaaggactttatttataaggca
actctggaagtggtgacaagagaacgctcatcagacatctataccttcaccatagtacga
gttattaaagaagggactgatataaaagtgctgaatgagcctcgagacttttacattcac
attgcctgcaaagacaagctcaagttgatggaaggcaaggactatctcatcatgggtcct
gagccaacgaaaatacaagacagttggcactacacgatcagaacgagcagttggttggag
tactggcctacgcaggaggagagtcaagataacaacaacaacagggatagatacatcgga
ctgagcagattaagcaacctcctggaaaatgagggatgcaccacttaa
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integrated database retrieval system
