Silurus meridionalis (southern catfish): 124378340
Help
Entry
124378340 CDS
T08004
Symbol
nup133
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124378340 (nup133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124378340 (nup133)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124378340 (nup133)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124378340 (nup133)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124378340 (nup133)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
TetR_C_18
Pox_A3L
Motif
Other DBs
NCBI-GeneID:
124378340
NCBI-ProteinID:
XP_046693896
LinkDB
All DBs
Position
24:complement(4871817..4885661)
Genome browser
AA seq
1139 aa
AA seq
DB search
MFTPRGTPGTPGRRHTTRTGGRKNINTPSGLLFSPRRASLTPGRATPTRVQSCTTVDSDH
FDVQTFGSSLPVKVMEALTMAEADDQISVKVEETGWAWMVCGERLIIWKISQTAVAKLSV
CKDLQLSPSVYAYSADLISISSSSALESASVQSVCVLAVSPEGSARFWPSLAHEGTYTET
HTDLGGHLCNYVTAVRGGSFIVSSYRGQLLRVGMEASGKLYQRAVQQGQGMLSGIGRRVS
SLFGLRSPPADTSVYSVLWARDSGCLYTLSTCGLNKWEVGDTTEVQVLSWNACPSLSDSI
ADAIWGSESNYAEMKAGVNVAYLDMQLSHTGLVVLAAAWHPADNPCLAYFCLVTLPDTML
PASEELYVEVTKYNPPFQSEEELHKTRLVLPRVKSPAAYLYNEELVYTCTTGAGRSGLPE
EKLTFNASGDRIRGGGVCADLPVVFSHMNGLVAVVPRESASILPETMEDSLCTSLAGPGP
EGALETTLKMDTVAQEDKTKLLKQAFLEFCRNRVMEAQKITDELFPDDGEGGVRGELDTL
VTQIDLDLVDDYPASDPRWAESVPDENAGFPLTSLILLHQLEDKMKAHHFFMDFLLQTGL
LDRLTWTTVRSSPMATRLLLCEHAEKLSAAVALKNHHSKQPELVNAAIAVTLSKTAKSVP
SSLTPADVFFREVSRISSIFESLLDEEEKCLKENPVTSVKWAEVVLSVNIIIKEMLQAAT
QYRETKASLYRAAENAPPEPEYIPWTASGGVGGVRTVITRQHDVILRSVYPHADSGLRST
LSEQLVALLDSLLGGYVAQLTSLRRPRQQERYDALEMEYTQRRSELLTPLLELGQYQWVA
ALAEKYCDFDILVQMCEQTDNQTRLQHYMTKFADQNFADFLFRWYMEKGKRGKLLSQPIA
QHQQLASFLQAHEHLSWLHHIHVQDFQSAHHTLYSQANSETRYFSKKKTLLALSKLTALA
SDMPEPLQRQQVNDIVEQERFLLHQETLPKQLLEDKQQNMDTMPLLSAHNLVNLYICDEN
RGANEYDFKKALDLLEYIDKEDAVDVAALKCAIFSKALKKDWKENWEASDGSDDPLEAAS
DSIFVKILQKLIQEGVPLHEYLPDVKELLQVDELNCLKSKPXFEFLLRANYEHFIQSQI
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtttactccacgcggaacaccaggcacaccgggacgccggcacaccaccagaaccggc
ggcaggaagaacatcaacactccgtcaggactgctgttctccccacggagagcttctctt
acacccggccgagcaactccgacacgtgtacagagctgcaccacggtggactcggaccac
tttgacgtgcagacgttcggctcgtctctgcctgttaaagtgatggaggctctgaccatg
gcagaagcggatgaccagatctcggtgaaggtggaggagacgggctgggcgtggatggtg
tgtggggagaggctgatcatttggaagatctcacagactgcagtagcgaagttgtctgtg
tgtaaggacctgcagttgtcccccagtgtgtacgcctacagtgctgatctcatctccatc
agctcatcatctgcgctggagtcagcatcggtgcagtctgtgtgtgtgctggccgtgtct
ccggagggttcggcccggttctggcccagtctggcccacgaggggacgtacacagagacg
cacacggatctgggaggacatctttgtaactacgtcacggccgtcagggggggcagcttc
atcgtgtcctcgtaccgcgggcagctgctccgggtcggtatggaggcttccggaaagctc
tatcagcgggcggtgcagcagggacaggggatgctgtcagggatcggacgacgcgtctcg
agtctgttcggccttcgcagcccccccgccgacaccagcgtgtatagtgtgttgtgggct
cgagactcaggatgcctctacactctcagcacgtgtggtttgaacaagtgggaggtcggg
gacaccacggaggttcaggtcctgagctggaacgcctgcccgagtctgtcagacagcatc
gcagacgccatctggggttcggagagtaactatgcagagatgaaggcaggtgttaacgtg
gcatatctggacatgcagctcagtcacactggtttggttgtgttagctgcagcgtggcat
cctgctgataatccatgtttggcgtatttctgcttggtcacacttccagacaccatgcta
cctgcgtcagaagaactctatgtagaggtcaccaagtacaaccctccatttcagagtgag
gaggagctccataagacgaggttggtgttgccgcgggtgaaaagtcctgccgcgtatctc
tataacgaggagctggtgtacacgtgcaccaccggtgccgggcgcagcggcctccctgaa
gagaagctcacgttcaatgcctccggtgaccgtattcgcggcggaggcgtgtgtgccgac
ttgcccgttgtcttctcccatatgaacggcctggttgccgtggtgcccagagagagtgcc
tccatcttgccagagaccatggaggattctctgtgtacttccctggccggacctggacct
gagggggcgctggaaacaacgctgaaaatggacacagtagcacaggaggacaaaacgaag
ctgctgaaacaagccttcctggagttctgccggaaccgcgtgatggaggcccagaagata
acggatgagctctttccagatgacggcgagggcggggtgagaggggagctggacacactg
gttactcagatcgacctggacctggtggacgattaccccgcctcagatcctcgctgggcc
gagtctgtgcctgacgagaacgccggctttccgttgacctctctgatcctgctgcaccag
ctggaggacaaaatgaaagctcaccacttcttcatggacttcctgctgcagaccgggctc
ctggaccgtctcacctggacgacagtgcgctcgtctcccatggcgacgcggctgctgctg
tgcgaacacgctgagaagctgtcagcggccgtcgctctgaagaaccatcacagcaagcag
ccggagctggtgaacgccgccatcgccgtcacgctgagtaaaaccgccaagagcgtcccc
tccagcctcacacctgctgacgtcttcttcagagaggtgtctcggatctcgtcgatcttc
gagtctctgctggacgaggaggagaagtgtctgaaggagaaccctgtgacctctgtgaag
tgggcggaagtcgtgctcagcgtcaacatcatcatcaaggaaatgctccaagcggcaaca
cagtacagagagactaaagcatccctctacagggcagcagaaaacgccccaccggagcca
gagtacatcccatggacagcctcgggtggagtgggtggagttcgtacagtcatcacccgg
cagcatgacgtgatcctgcgcagcgtgtatcctcatgccgactcgggactccgtagcact
ctcagcgagcagctggtggcgctgttggactcgctactcggcggctacgtggcccaactg
acctcgctgcgtcgcccccggcagcaagagcgctacgacgcactggagatggagtacacg
cagcggcgctccgaactgctcacaccgctacttgagctgggtcagtatcagtgggtggca
gcgttggctgagaaatattgtgattttgacatcctggtgcagatgtgtgagcagacggac
aaccagactcgcctacagcactacatgactaaatttgctgaccagaatttcgccgacttc
ctgttccgctggtacatggagaaggggaagagagggaagctgttgtctcagcccatcgct
cagcaccagcagcttgccagcttcctgcaggcccatgagcacctgagctggctgcaccac
atccacgtgcaggacttccagagtgcccaccacaccctgtacagccaggctaactcggag
acgcgctacttcagcaagaagaaaaccctgctagcgctgagcaaacttacagctttggcc
tcagacatgcccgaaccgctgcagcgccaacaagtgaacgatattgtggagcaggagcgt
ttcctccttcatcaggagactcttcctaaacagctgctggaggacaagcagcagaacatg
gacaccatgcctctactgagtgcccataatcttgttaatctgtatatatgtgatgaaaac
cgtggcgctaatgagtacgacttcaagaaagccctcgacctgttggagtacatcgacaag
gaagatgctgtggatgttgcagctctgaagtgtgcaattttcagcaaagccttgaagaaa
gactggaaagaaaattgggaagcctcagatggcagtgatgatcctttggaggcggcgagc
gacagcatctttgttaaaattctccaaaaactcattcaagaaggggttcctctgcacgag
tatctacccgatgtaaaggagctgctgcaggtggatgagttgaactgcctcaaatctaaa
ccantttttgagttcttactgagagccaactatgagcacttcatccagtctcagatctga
DBGET
integrated database retrieval system
