Silurus meridionalis (southern catfish): 124378354
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Entry
124378354 CDS
T08004
Name
(RefSeq) far upstream element-binding protein 2 isoform X1
KO
K13210
far upstream element-binding protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124378354
03041 Spliceosome [BR:
smeo03041
]
124378354
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124378354
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124378354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
124378354
NCBI-ProteinID:
XP_046693930
LinkDB
All DBs
Position
24:complement(3470205..3479481)
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AA seq
671 aa
AA seq
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MSEYSTVPPPPPPGAGAAALGAAGIKKDAFADAVQRARQIAAKIGGEVTGGPVSNNGGTE
GYPFSAQKRSLEDGDQPDSKRMAPQSDRDNATALSISAQLAALSQQSGRPSALTEEYRVP
DGMVGLIIGRGGEQINKIQQESGCKVQIAPDSAGLPERSVSLTGSHESIQKAKMLLDDIV
SRGRGTPPTSFHESNGSGHMQEMIIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDPSQ
GPNMDKPLRIIGDPYKVQQAREMVQEILRERDQFGDRNEYGSRMGGGGGGGGGGIEVRVP
VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKPDDGSGPDKVAHIMGPPDRCEHAAGIINE
LLQSIRVREEGGGGPPGPPGTGMPPGGRGRGRGPGNWGPPGGEMTFSIPAHKCGLVIGRG
GENVKSINQQTGAFVEISRQPPPNGDPNFKLFTIRGNPQQIDHAKQLIEDKIEGPLCPVG
PGPGGPGPGPAGPMGPYNPNPYQPGPPGAPPHGGPPGAHQYPPQGWGNTYQQWQPPAPHD
PSKAAADHSAAWAAYYAQYYQQPGGGAIPGQTPSAQPAAPAPADQNQAAQNSGQPDYTKA
WEEYYKKMGETQAGSGASPAAGGTPAATGAAGQTDYSAAWAEYYRQQAAYYGQNPQNPGQ
PAATQQGQQAQ
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtacagcacggtgccgccgccgcctcctcccggggccggagcagcagcactg
ggagccgctgggatcaagaaggacgcgtttgcggacgcggtgcagcgcgcacggcagatt
gcggctaagatcggtggagaagtgacaggcggccctgtgagcaataacggcggtacagag
gggtatcctttctcagcacagaaacgatcactggaggacggagatcagcctgacagtaag
aggatggctccacaaagtgacagggacaacgctacagcactgtctatcagtgctcagctg
gcagctctctctcagcagagtggacgtccttcagctctgacagaggagtacagagttcct
gacggcatggtcggcctcatcattggccgaggaggagagcagatcaataagatccagcag
gagtcggggtgtaaggttcagatcgctccagacagcgcaggattacctgagagaagcgtc
tcgctcaccgggtctcatgagtccattcagaaggccaagatgctgttagatgacatcgtt
tctcgaggacggggaacaccgcccacctccttccacgagtccaacggtagcggccacatg
caggagatgatcatcccggcgggaaaagccggcctcgtcatcggcaaaggaggagaaact
atcaaacagctccaggagcgtgctggagtgaagatgattttgatacaagatccttctcag
ggaccaaacatggacaaaccccttcgcatcattggagacccgtacaaagtgcagcaagcg
agggagatggtgcaggagattctccgagagagggatcagtttggagacaggaacgaatac
ggttcacgcatgggagggggtggcggcggcggaggtggaggaatagaggtgcgtgtaccc
gtgccacgtcactcggtgggcgtggtgattggccggagcggtgagatgattaaaaagatt
cagaacgacgcaggagtccggatacaattcaaaccagatgatggtagtggacctgacaag
gtggctcatatcatggggcctcctgaccgctgtgagcatgctgccgggatcatcaacgag
ctcctgcagagcatccgtgtgagagaggagggtggagggggacctccaggtcctcccgga
acaggtatgcctccaggtgggcgtggtaggggccgcggcccaggtaactggggtccccct
ggcggcgagatgaccttctctatccctgcccacaaatgcggcctggtgatcggccgagga
ggagagaacgtcaagtcgatcaaccagcagacgggcgcctttgtggagatctcgcgccag
ccgccgcccaacggggaccccaacttcaaactgttcaccatccgtgggaacccgcagcag
atcgaccatgcaaagcagctcatcgaggacaagatcgagggtcctctgtgtcctgtaggt
cccgggcctggtggtcctggtcccggtccagccggccccatgggtccttataacccaaat
ccatatcagccggggcctccaggagctcctccacatggaggtcctccaggtgcccatcag
tacccccctcagggttggggaaacacttaccaacagtggcagccgcctgcacctcatgac
cccagtaaagccgcggcggatcacagcgccgcctgggcggcgtattacgcgcagtattac
cagcagcccggaggaggtgccataccgggccagacgcccagcgcacagcccgccgctccc
gcccccgccgaccagaaccaagcggcccagaactcggggcaacccgattacaccaaggcc
tgggaagagtactacaagaaaatgggggagactcaggcaggcagtggcgctagtccagca
gcaggtggcactccagcagcaacaggagcagcaggacagactgactacagcgctgcctgg
gccgagtactacaggcaacaagctgcttattatggccaaaatccacagaaccctggacaa
cctgcagccacacagcagggccaacaggcgcagtaa
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