Silurus meridionalis (southern catfish): 124378541
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Entry
124378541 CDS
T08004
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3-like isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
124378541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124378541
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Others
GGA
124378541
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Motif
Pfam:
VHS
Alpha_adaptinC2
GGA_N-GAT
GAT
Motif
Other DBs
NCBI-GeneID:
124378541
NCBI-ProteinID:
XP_046694212
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All DBs
Position
24:465824..479719
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AA seq
561 aa
AA seq
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MAEDQSVDFLLLCLNKATDPENSSERWDCMQKFCQHVNTHTNGPQIAMRLLAHKIQSPQE
KEALQALTLLEVCMNNCGKRFQSEAAKFRFLNELIKVLSPKYLGVCSTEQVKQRVTEVLY
SWTQWLKDEPKVQEAYSMLKKQGIVKKDPRLPTTVTMPPPSPRQEVSVFDNEDTSKLLSQ
LLKSGRPEDLEMANTLIKSTLQEEQEKMDKESRRVSTIQEVKNCTLQLGLLLNQQHTQHT
PEMQELYERCDRLRSNLFRLASDTVNNDEALAEILHRNDELTHVMTLYREKTPKPQTETE
TVLVSPVKSYHLIDFSVLGDDAPCGQVEQNTTLLQEEEQQKIHGADSSRTPLSVKSYLDD
LLQLEDTENIMSEMGQSDITHNASVFTMTDSELRSRSTANENQPITSSGVHNPRPLSSLA
DINVSLDSIKPSHIKPLTVYNHRGVHVSLHFTKESPPSHPDVAVIIISAVNTSPLPVSDF
LFLAAVPKNMCVRLQAATGNSLPSFSPLLPPAALSQILLLSNPLRKPVRLRFRVTLTLGQ
ERLQQDGDIEQFPQWNSWTHI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagatcagagtgttgactttcttcttctttgtctaaataaagcaacagatcct
gagaactcatcagagagatgggactgcatgcaaaagttctgccagcatgttaacacacac
accaatgggccccagattgcgatgcgactcttggctcataagatccagtctcctcaggag
aaggaagctcttcaggctcttactttgttggaggtgtgcatgaataattgtgggaaacgt
ttccaaagtgaagctgcgaagttcagattcctgaatgaactcattaaagttctgtctcca
aagtatttgggtgtgtgtagcacagaacaggtgaaacagagagtgacggaggttttgtac
agctggactcagtggttgaaggacgagccgaaggttcaggaagcttacagcatgctgaag
aaacaaggaatagtgaaaaaagacccgagacttcctaccactgtgacgatgcctccacct
tctccacggcaggaagtgtctgtatttgataatgaagacacatcaaagctgctgtcacag
ttactaaagagcggccgtccagaagacttggagatggctaacacgctgataaagagcaca
ctgcaagaggagcaggagaagatggataaggagagcagacgtgttagtacaattcaggaa
gtgaagaactgcacattgcaacttggactactcctgaaccaacaacatacacaacacact
ccagagatgcaggagctgtatgagcgctgtgataggctgagatcaaacctttttcgactg
gccagtgacactgtgaacaacgatgaagctttagctgagattctgcacagaaatgatgaa
cttacacatgtgatgactctgtacagagagaaaacaccgaaaccacaaactgagacagag
acggtgctcgtgagtccagtgaagtcgtaccacctgattgatttctcagtgctgggagac
gacgccccctgtggccaagttgagcagaacacaactctactgcaggaggaagaacagcag
aaaatacatggggcagactcaagcagaactccactcagtgtgaaatcctacctggacgac
ctgctacagctggaggacacagagaacattatgagtgagatgggacaatcagacattacc
cacaatgcctcagtgttcacaatgacggattcagagctgcgttccagatcgacggctaac
gaaaatcagccaatcacatccagcggcgttcataatccccgccccctttcatccctcgct
gacatcaatgtctctctggactccatcaaacccagccacattaagcctttgacagtgtat
aatcatcgcggtgtccatgtctctctgcacttcactaaagaatctcctccgtctcacccc
gatgttgccgtcatcatcatctcggcggttaacacctcgccacttcctgtttctgacttc
ctcttcctggctgccgttcccaaaaatatgtgtgtgaggctgcaggcagctacaggaaac
tcattgccttcattcagccctctgctgccccctgctgctctctcccaaatactactgctc
tccaacccactcaggaagccggtgcgtctgcgtttcagagtgactctgactctgggacag
gagagactgcagcaggacggagacattgagcagttccctcagtggaactcctggactcac
atctga
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