Silurus meridionalis (southern catfish): 124378597
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Entry
124378597 CDS
T08004
Symbol
rfx1b
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124378597 (rfx1b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Other basic domains
RF-X
124378597 (rfx1b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
DUF3156
Motif
Other DBs
NCBI-GeneID:
124378597
NCBI-ProteinID:
XP_046694282
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Position
24:complement(5078124..5106636)
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AA seq
839 aa
AA seq
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MATPGYTEELQPSQPRGGSVTASKSGQLKTSPTITPVFLSDIQTSSGSSPSLSSRITQTT
PPAILKKAVLATPTQVTAATTEYTVSEIQSSASRSSNGQNTPQYIVVTVSEGSIHSNDSV
SDSSPPATVQTGVPTHVVQTAQQRSVVQTTAKSGQHGVGNLHITPEISQIGHVYSSQVQF
VDGDSNYNTTPIRSSTYSFPESTLYGQATPSGSYYEDPPTTGSQVTTPTTSVSTGFSGGG
TGVTVASGASSSGASGGAAGAGVVVGGGAGSVAGPGAAAGYVVPGSYVMGSGGQNYTHNI
RASPATVQWLLDNYEKAEGVSLPRCTLYYHYLLHCQEAKLEPVNAASFGKLIRSMFIGLR
TRRLGTRGNSKYHYYGLRIKSSSPLHRLMEDQQHLAMRQQPFSHKNRIRPVQKVEGMTNG
MALGAGQGAGQGVGLFDISSQIQQYQQFLDASRSLPEFPEVDLQEKTLPEGILPEHIQAF
QQLYREHCEAIVDVMVNLQFPLVETLWKSFWRFSKGQTNEALDLHSESEKRLPKACLIVL
CQYEPVLQWSRNCDNTLYQTLVEILIPDVLTPIPSALTQAIRNCAKSLENWLTSAMMNIP
EEMVRIKVVCTGAFAQTLRRYTSLNHLAQAARAVLQNSAQITQMLNDLNRVDFNNVQEQA
SWVCACEERTVQRIEQDFKTTLQQQKSLEQWAAWLDNVVTHVLKPYTSSPSFTKAAKHFL
LKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLVEHRVAQAKGETPIAVMGEFA
NLNRSDSSADAEKEEEEEEEDESDDDQMAIPVDPSAMGEESLEPPAKLARTDLFSSTHN
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccaggctacaccgaggagctccagccctcccagcctcgagggggcagcgtg
accgcatccaaaagcggccagctgaaaaccagtcccaccatcacgcccgtgttcctctct
gacatccagacctcgtccggctcctccccttccctttcgtcaagaataacgcagaccacg
cctcctgcgatcctcaagaaggccgttctggccacgcccactcaggttacggcggcgacg
acggagtacaccgtatccgagattcagagctccgcctccaggtccagcaacgggcaaaac
acgccacagtacatagtggtgactgtttcagaaggatctatccattcgaacgattcggtg
tcagactccagtcctcctgccaccgtccagacaggtgtgccgacacacgtggtgcagacc
gcacagcagaggtcagtagtgcagaccacagccaagagcggccagcacggagtcgggaac
cttcacattactcctgagatctctcagataggccatgtctactccagccaggttcagttt
gtggacggagactcgaactacaacaccacacccatccgttccagtacatactccttccct
gagtccaccctctacggacaggccacaccctccgggtcgtactacgaagatccgcccacg
acggggtcgcaggttacgaccccgacgacttccgtgtctacaggattctcagggggtggc
actggggttacggtggcatctggagcatcgtcttcaggcgcaagtgggggcgcggctgga
gctggtgtggtggttgggggcggagctgggagcgtggccggcccaggagcagcagcgggt
tacgtggttccgggaagctacgtgatgggaagcggaggacagaattacacgcacaacatc
cgtgcctcgcctgctactgtgcaatggctgttggataactacgagaaggcagagggtgtg
agtctgccacgctgcacactctactatcactacctgctgcattgtcaagaggccaagctg
gagcccgtcaacgccgcctccttcggtaaactcatccgatccatgttcatcggactgcgc
acccgccgactcggcaccagaggaaactcgaagtaccactactacggccttcggatcaaa
agcagctcccccctgcaccggctcatggaagaccagcagcacctggccatgagacagcag
cccttctcacataaaaacaggataagaccggtgcagaaggttgagggaatgaccaatggg
atggccttaggggcggggcagggagcgggccagggggtggggctgtttgatatcagctcc
cagatccagcaatatcaacagtttttggatgcgtctcgctctctgcccgagttcccagag
gttgatctccaggaaaagaccctgccagaggggattcttcctgaacatattcaagcattt
cagcagctctaccgggaacactgtgaggcaatagtggatgtgatggtgaacctgcagttt
cctctggttgagactttgtggaaaagcttctggagatttagcaaggggcagaccaacgaa
gcactcgaccttcatagcgaatctgagaagcgactgccaaaagcatgtctgatcgtgttg
tgccagtacgagccggttctacagtggagtcgcaactgtgacaacacactctaccagacc
cttgtggagatcctcatccccgatgttctcacacctatacccagtgccttaacacaagcc
atccgtaactgtgccaagagtttagagaactggctcaccagtgccatgatgaacattcca
gaagagatggtccgcattaaggtggtgtgcacaggagcatttgcgcagactttgcgcaga
tacacttctctgaaccacttggctcaagcggccagagccgtactgcagaactcggctcag
atcacacagatgctgaacgacctcaaccgagtggactttaacaacgtgcaggagcaagca
tcgtgggtgtgtgcgtgcgaggaacgcacggtgcagaggatcgagcaggactttaagacg
acgctgcagcagcagaaatctctggagcagtgggccgcgtggctggacaacgtcgtcaca
cacgtcctcaagccctacacgtccagtccgtccttcactaaagccgccaaacacttcctg
ctcaagtggagcttctacagctcgatggtgatcagggatctgactctgcgcagtgccgcc
agtttcgggtcgttccacctgatccggctgctgtatgatgagtacatgtattacctggtg
gagcacagagtcgctcaggccaaaggagaaacgcccatcgctgtaatgggagaatttgcc
aatctaaatcggagcgacagctcagctgatgcagaaaaagaagaggaagaggaggaagag
gacgagagcgacgacgaccagatggcgattccggtcgacccgagcgcgatgggagaggag
tctctggaaccacctgccaaattagccaggacggatctgttcagcagcacacacaactaa
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