Silurus meridionalis (southern catfish): 124378626
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Entry
124378626 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124378626
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124378626
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Serotonin (5-HT3)
124378626
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
GbpA_D3
Motif
Other DBs
NCBI-GeneID:
124378626
NCBI-ProteinID:
XP_046694316
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All DBs
Position
24:7990037..8003922
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AA seq
463 aa
AA seq
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MTRQRGLTLYMRCLFVLFVVETQVSCVELTVINCTPNNTLYKQVENALWSKNIRPVAHPS
DVLTVKLGLTIAGIPDVSEKDQVMTVFMILTIDWLVPFLKWDINTCGTEKISYPVSDLWL
PDIEIKELMDKDSKQSIPYLQINYTGGLHLVKVKRVPVSCQLNIYRFPFDVQECSITFLS
LIHEEDEMILTSKSVEFSTKSSVGSDSGWKLENLASRNYTYTLTSKRSFSCQEYNLTLRR
EASLYVVNLLVPSCFLSLLDLCSFILPPQNMDRSAFKMTLILGYTVFLIITNDXLPNSVY
PTPLINVFFSLSLGLMVASLLETMLIVNLSNFPNKYPKVPRWVHVLILDFLGRLLFISHK
CPDAQVEVVLNSYAKGNPDITAMMFSHTGENEGMEGSAVVNELKKVAQDLLTIRLRVEEH
LRPKQAEIEWNLIANVIDRFLFLIYILFVIASYITIIVLWSSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgacacggcaaagaggactcacactgtacatgcgatgtctgtttgtcttgtttgttgtt
gagactcaagtttcctgtgtggaattaactgtaattaattgcacccccaataatacactg
tataaacaagttgaaaatgccctttggagtaaaaacatacgccctgttgcacatccaagc
gatgttctaactgtgaaactaggccttactattgcgggaatcccggatgtgagtgaaaag
gaccaggtcatgacagtatttatgatattaacaattgactggttagtaccgtttctgaag
tgggatatcaatacgtgtggaacagagaaaatctcatatccagtgtctgatctgtggctg
ccggatatagaaattaaagagttaatggataaagacagtaagcagagcattccctaccta
cagataaattacactggagggcttcatttagtcaaagtcaaaagagttcctgtttcgtgt
cagttgaatatctacaggtttccgtttgatgtccaggaatgctcaattactttcctttcc
ctcattcatgaagaagatgaaatgatcctaacttctaaatcagtggaattttctacaaag
tcatctgtaggttctgattcgggatggaaactcgaaaatttggcaagccgtaattacact
tatactcttaccagcaaacggtctttttcttgtcaggagtacaatctaacccttagacgt
gaggccagtctctatgtggtgaacctccttgtccccagctgtttcctgagtctgttagac
ctgtgcagtttcatcttgcctcctcaaaatatggatcgctccgctttcaaaatgaccctt
atcctcggctacactgtctttctgatcatcactaatgatnttctgcctaacagtgtctac
cctactcctctaataaatgtgtttttttctctcagcttggggctgatggtagccagcctt
ttggagacaatgttaattgttaacctcagtaacttcccaaacaaataccccaaagtaccc
cgttgggtgcatgttctcattctggacttcttgggacgcctcctattcatatcccacaaa
tgccctgatgctcaagtggaagtggttttaaactcatatgcaaaagggaatccagacata
acagcaatgatgttttctcacactggagaaaacgaagggatggagggttctgcagttgtg
aatgagctgaagaaagtggcccaagacttgctgacaattcgactgagggtggaagaacac
ctgagacccaagcaggctgagattgaatggaatctgatcgcaaatgttattgatcgcttc
ttgttcctgatttatatcctctttgtgattgcaagctacatcactataattgtcttatgg
tccagttcctaa
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