Silurus meridionalis (southern catfish): 124378645
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Entry
124378645 CDS
T08004
Symbol
pou2f1a
Name
(RefSeq) LOW QUALITY PROTEIN: POU domain, class 2, transcription factor 1a
KO
K09364
POU domain transcription factor, class 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124378645 (pou2f1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124378645 (pou2f1a)
03021 Transcription machinery [BR:
smeo03021
]
124378645 (pou2f1a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
124378645 (pou2f1a)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
124378645 (pou2f1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124378645
NCBI-ProteinID:
XP_046694348
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All DBs
Position
24:14775188..14795038
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AA seq
654 aa
AA seq
DB search
MADGGSASQDERLRADSTSTVTELSKTAMDNGIHVVQAAQTNGLDSQQKPNGQATSAISN
MQAQALLQQLSLSTAQQQQLFLQQAQQILAAAAQQQSSGQQSSTTGANLSASAATPITQI
PFSQPIQIASQLQPTGLNLQQFVLLQPGQIQPTQFIISPSPQGQTGLLQGLQAQNLLTQL
PHSQAHILQTTASIPLTTQAATPTRKIAAMPSAAAPTTKRVDVPLVEEASELEELEQFAK
AFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDA
ENMTSESAVSSPSDMSPGISEGLNRRRKKRTSIDTNIRIALEKSFLEQSQKPTSEEITMI
ADQLNMXKEVVRVWFCNRRQKEKRINPPSSSTPGTPIKTVFTNSPSVISSASNTLNASSA
LTLSTASVPNLTLAGTTLGPVTSNTATVISLAPAIATPALTMTSPSLTPSATASLTAIKQ
EAARTMETGLSVATSTAQGPGQFVMSSAGLGGANLAAMAAAAGFNPGIISPSQLTQGGAL
LSLAPASLGNALTPTALMNNTTLATIQALASGGAFPITSIDGNGSMFFANAGAGGPTTNL
MTTPILFNSPLSLLPAGVLSAGGAGGGALNLQVTGDAHQSAMPVKSITVASKAQ
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggctcagcgagtcaagatgagcgcttgcgagcagattctacaagcaca
gtaacagaattaagtaaaacagccatggataatggaatacatgtcgtccaagctgctcag
acgaacgggttggactcgcagcagaaaccaaatggacaagcaacaagtgcaatcagcaac
atgcaggcacaagccttgcttcagcagttgagtctgagtacagcacagcagcagcagttg
tttctgcagcaggctcagcagatcctggcagccgctgcccagcagcagtcatctggccag
cagagcagcaccaccggagcaaacctctctgcttctgctgctacaccaatcacccagatc
cccttctcacagcctatccagatcgcatctcagctgcagcctacaggtcttaacctgcag
cagtttgtgttgttgcagccaggacagattcagcctacacagtttattatctcgccttca
cctcaaggccagacgggtcttcttcaaggccttcaagcccagaatcttctgacacaacta
cctcacagtcaagcccacatcctgcagaccacagcaagcattcctctgactacacaggca
gcaacacctacacgaaagatagctgccatgccatctgctgcagcgcccacaacaaagcgg
gtggatgttcctctagtggaggaggccagtgagctggaggagctggaacagtttgcaaag
gcctttaaacagagaagaattaaactgggctttactcagggagacgtcggcttggccatg
gggaagctgtacgggaatgacttcagccagaccaccatctctcgctttgaggccttgaac
ttgagcttcaagaacatgtgcaagctcaaacctttgctggagaagtggctcaatgatgca
gaaaacatgacttcagaatctgccgtttccagtcccagtgacatgtccccaggcatctct
gaaggtctgaatcgacggcgaaagaaaagaaccagcatcgatacaaacattcgcatcgct
ttggagaaaagctttctggagcagagccagaagcctacctctgaggagatcacgatgatc
gcagatcagctaaacatgngaaaagaggtggtacgagtgtggttctgtaaccgccgacag
aaagagaagaggatcaaccctccaagcagcagcacacctggtacccccatcaaaacagtc
ttcacaaactccccgtcagtgatatccagtgcgtcaaacacactgaatgccagttcagcg
ctcactctcagcactgcctccgttcccaacctcacacttgctggtacaactctcggacca
gtcacctcgaacaccgcgacggtcatctctttggcgcctgccatcgccactccggctcta
actatgacgtcaccgtcgctcaccccctccgctacagcaagtctgaccgctatcaaacag
gaagcggccagaacaatggagacgggcttaagtgtagcaacgtcaactgcacaagggccc
ggacagttcgtcatgtcttcagcagggttaggcggagcaaatctggcagccatggcagca
gcagcaggatttaacccagggattatttcaccttctcagctaacacaggggggagcattg
ctaagcttggctccagcgtctcttggcaatgctctgactccaacagcactgatgaacaac
accacactggctactattcaggctcttgcatctggaggagcgtttcccataacctctatc
gacggaaacggcagcatgttcttcgccaacgccggcgcaggaggtcccacgaccaatctg
atgaccactcccattctgttcaactcgcccctgtctctgctccccgccggggtgctttca
gcaggcggagctgggggcggggctctcaacctgcaggtcaccggggatgcgcaccagagc
gccatgccggtcaaaagcatcactgtggcctccaaggctcaatga
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