Silurus meridionalis (southern catfish): 124378660
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Entry
124378660 CDS
T08004
Symbol
lamp1a
Name
(RefSeq) LOW QUALITY PROTEIN: lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03272
Virion - Hepatitis viruses
smeo03273
Virion - Lassa virus and SFTS virus
smeo04140
Autophagy - animal
smeo04142
Lysosome
smeo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
124378660 (lamp1a)
03272 Virion - Hepatitis viruses
124378660 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124378660 (lamp1a)
04142 Lysosome
124378660 (lamp1a)
04140 Autophagy - animal
124378660 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124378660 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124378660 (lamp1a)
04090 CD molecules [BR:
smeo04090
]
124378660 (lamp1a)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
124378660 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
124378660 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
124378660 (lamp1a)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
124378660 (lamp1a)
CD molecules [BR:
smeo04090
]
Proteins
124378660 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Motif
Other DBs
NCBI-GeneID:
124378660
NCBI-ProteinID:
XP_046694366
LinkDB
All DBs
Position
24:14952701..14972139
Genome browser
AA seq
417 aa
AA seq
DB search
MTHKLLPCVAISCFIILGWMSAAHGVILEVXNGNSTCIKADISANFTITYPVKNGTKTVV
VPLPESAIVGNGSSCGGEGASPDLLASFGNGHSLGLLFSSTGRIYRVANLSLTYNLTDNT
TFPESSSKAVMVLTTNNSQISAQLNTTYRCMSSSVVNLGGPGVTVTFFNIHMQAYMPSAN
LSTNETICAADVPSTTVVPTTTTTPISPTTPVTPTNPERGNYSILNSNGTTCLLARMGLQ
LNVTYFSKSQNKTVVAIMNMQPNRTSFSGSCESTTTTLLLTGDLANLTFVFTLNTTTSKY
QLSTVNMSAFWEDMTAQFQVSNSSLQYMQGTLGRSYMCSVEEVLPVSTNFSLNTFELQVQ
PFDVRNNEFGPADVCRMQKDNMLVPIIVGACLAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgacccacaaactgctgccctgcgtcgccatcagctgctttattattctgggctggatg
agtgcggcacacggcgtgatacttgaagtgnaaaatggaaattcgacctgcatcaaagca
gacatctcggccaacttcactattacataccctgtcaaaaatgggacgaaaaccgtggta
gtgcctctcccagaatcagcaatagttggaaatggcagttcctgtggaggagaaggcgcg
tctccagacttgctggcctccttcggtaatggtcactctctgggtttgctgttctccagc
actggccgtatatatcgcgtggccaacctgagtctgacctacaatctgactgacaacacc
acctttcctgagtcctccagcaaggcggtcatggtgttgactacgaacaactctcagatc
tcagcacagctcaacactacatacaggtgcatgagctccagcgtagtcaatctgggaggc
cccggagtgaccgtcacattcttcaacatccacatgcaggcctacatgcccagcgctaac
ctgagtactaacgagaccatttgtgccgccgatgttcccagtaccactgtcgtacccact
accactaccactcccatctccccgactacccctgtcaccccaactaaccctgagcgtggc
aactacagcatcctaaactccaatggcaccacctgcctcctggcccgaatggggctgcag
ttgaatgttacatatttctccaaatctcagaataagactgttgtggccatcatgaacatg
cagcccaacaggacgtctttctccgggtcatgtgaatccacaaccactactctgctgctg
actggagatctcgccaacctcaccttcgtgttcacgctgaacaccaccaccagtaaatat
cagctcagcaccgtgaatatgtctgccttctgggaagatatgaccgctcaattccaggtc
agcaacagcagtctccagtacatgcagggaaccctgggccgctcctacatgtgcagcgtc
gaggaggttcttcctgtgagcaccaatttctccctcaacacattcgaattgcaggtgcag
cccttcgatgtccgcaataacgagtttggaccagccgatgtgtgtcgaatgcagaaggac
aacatgctggtgcccatcattgtcggcgcctgcctggccgggcttgtacttattgtcctc
atcgcctacttgattggcaggaagagaagtcacgccggctaccagaccatctaa
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