Silurus meridionalis (southern catfish): 124378661
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Entry
124378661 CDS
T08004
Symbol
tfdp1b
Name
(RefSeq) transcription factor Dp-1b isoform X1
KO
K04683
transcription factor Dp-1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03083
Polycomb repressive complex
smeo04110
Cell cycle
smeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124378661 (tfdp1b)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124378661 (tfdp1b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124378661 (tfdp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124378661 (tfdp1b)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124378661 (tfdp1b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
124378661 (tfdp1b)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
124378661 (tfdp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
RNA_pol_3_Rpc31
FMP23
Motif
Other DBs
NCBI-GeneID:
124378661
NCBI-ProteinID:
XP_046694367
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All DBs
Position
24:15049605..15064451
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AA seq
413 aa
AA seq
DB search
MMARDGGLKETSGELRVFTTQNVNPGTGAVVSLVTLHPTSIKQMMPKAVGASGVNMLSHV
VIGTPQRPTAPASAALLTSPRTPSAQFLTPQTHTREASPWSSGRSSRRGEKNGKGLRHFS
MKVCEKVQKKGVTSYNEVADELVTELSSGDNISPNESHVYDQKNIRRRVYDALNVLMAMN
IISKDKKEIKWIGFPTNSAQECKDLEAERQRRLERIKQKQSQLQELILQQIAFKRLVQRN
REAEQKNHRPPPNTVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNMFEIHDDIEVLK
RMGMAFGLESGKCTSENLKIARTLIPKAMEPFVTDMAQGVHRQINGGFSHTNRNQLFTRT
TNKHDNGAVATMASSSNSSCHGSSRDTPASFLEDEEEDEDDDDEDFDDDDDED
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaagagatggtggtctgaaagaaaccagtggagagctaagggtttttaccact
cagaatgtgaatcctggaacaggtgccgtggtgtctctggtgactctccatccaaccagc
attaagcagatgatgcctaaagcagtcggtgcctctggcgttaacatgctttcacatgtg
gtgattggcactcctcagaggcctactgctccagctagtgctgctctgttaaccagcccc
agaacacctagtgctcagttcctcacaccacagacacacacacgagaggcttcaccgtgg
tccagtggacgcagcagtagaagaggggagaagaatggaaaaggcttgagacatttctcc
atgaaggtgtgcgagaaggttcagaagaaaggtgtaacttcctataatgaggtcgcagat
gagctggtgaccgagctaagttcaggagacaacatctctcctaacgaatcacacgtgtat
gaccagaagaacattcggagacgggtatatgatgcactaaacgtcctaatggcgatgaac
atcatctccaaagacaagaaggaaatcaaatggatcggcttcccaaccaattccgctcaa
gagtgcaaggacctggaggctgaacgccagagacgacttgaaagaatcaaacagaaacag
tctcagcttcaagagcttatattacagcaaatagctttcaagcgcctggtacaaaggaat
cgcgaggcagagcagaagaatcacaggcctcctcccaacacagtcatccacctccccttc
atcatagtgaacaccagcaagaagacagtcatcgactgcagcatttcaaatgacaagttc
gagtacctgttcaacttcgacaacatgttcgagatccacgatgacattgaggtgctgaag
cgcatgggcatggcgttcgggctcgagtcgggcaaatgcacgtcggaaaatctaaagata
gcccggacccttatacctaaagctatggagccctttgtaacagatatggcacagggagtc
cacagacagattaatggaggcttttctcatacaaacagaaaccagctattcacaagaaca
acaaacaaacatgataacggtgccgttgcgaccatggcctcaagctccaacagctcgtgc
cacggcagctctcgcgacactccggcgtccttcctggaggacgaggaggaggatgaagat
gacgatgatgaggacttcgacgatgacgacgatgaagattaa
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