Silurus meridionalis (southern catfish): 124378836
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Entry
124378836 CDS
T08004
Symbol
mepcea
Name
(RefSeq) 7SK snRNA methylphosphate capping enzyme
KO
K15190
7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124378836 (mepcea)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
124378836 (mepcea)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bin3
Methyltransf_25
Methyltransf_12
Methyltransf_11
Methyltransf_23
Methyltransf_31
MTS
PrmA
Ubie_methyltran
FtsJ
Methyltransf_18
PCMT
Methyltransf_4
Motif
Other DBs
NCBI-GeneID:
124378836
NCBI-ProteinID:
XP_046694575
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All DBs
Position
25:557119..562524
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AA seq
682 aa
AA seq
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MIEMSVEKETVVANDRSAYASLARPQPELSGNCAVNPKNSAVTTHTGEENGTRDPAEEDV
NKTAVIEDVNTESVSVTQNQDGVQNPKPHQQRPNKRRSTISAGFKHPVFGKRRRRANSES
ESVLPTNFLLGGNIFDPLNLNSLLDEEVNRALNAETPKSSPLPPKSRDPVEILIPRDITD
PLNLNGCTRGDAGIVLSPFKSGGGRRRHRNRHHGGIVARGGVGRGRVGVLGEPENIESVV
GGDGVAMDVNQSEVSKSECMLTSPGYNLQNSPEPEAVLQVEMNESDFPPKQDVHEEKDNT
QTPGTHTSHRQRRRKRSSSRSENAGGPCWEKSRTTGPESAPQHPPNQRGQQRNNHKQTPR
NCNQHKPNQQHQHQKKKFQYGNYNQYYGYRNPGAIEDARIRVFEPEWFQGKEVLDLGCNT
GHVTLTIAKNWRPARIVGLDIDSTLIHAAKQNVRHYLSEVHTLQARKETGRGEDGEEKDK
EKPSVDIRQKGGSEDGENKTEQIKDSISSNENRLFPVSLCVSRGPIAAPPLPDTPTLPPG
NFPSNVTFVRANYVLDSDVLLETQREEFDVIMCLSVTKWIHLNWGDVGLRRFFQRVYRHL
RPGGLFILEPQPWNSYNKRKKLTETIHNNYFSIQLKPEQFSSFLTSEVGFSSYELLGTPN
TSSRGFQRPIYLFHKGTALESE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaatgtctgtcgagaaagagactgttgtagcgaacgatcggtctgcgtacgcg
tctttagcgcgcccgcagccagaactttccggaaactgtgctgtaaaccctaagaactct
gccgtaacgacacacaccggcgaggaaaatggaacccgtgaccccgctgaagaggacgtg
aacaaaaccgcagtcatcgaggacgtgaacacggagtcagtctctgtgacccaaaaccaa
gacggtgtccagaatcccaaaccccatcagcagagaccgaacaaacgtcggagtacgata
agcgccggctttaagcatcccgtgttcgggaaacggcgtcgccgtgccaactccgagagc
gagtccgtcctgccgaccaacttcctgctgggcgggaacatctttgacccgctcaacctc
aacagcttattggacgaagaggtgaaccgggctttaaacgcagagacgcccaaatcttct
ccgctgccacctaaaagccgggatccggtcgagatcctgattccgagggacatcacggac
ccgctgaacctcaacgggtgcaccagaggggacgccggcatcgtgctttcaccttttaaa
agcggcggaggacggaggcgacaccggaaccggcaccatggaggaatagtggcaagagga
ggtgtgggaagaggaagagtaggtgtattaggagaacctgagaacatagagagtgtcgta
ggaggtgatggtgtggccatggatgtcaaccaatcagaagtgtcgaaatcggagtgcatg
ttaacatccccagggtataaccttcagaacagcccagaacccgaagctgttttgcaggta
gaaatgaacgagtctgactttcccccaaaacaggacgttcatgaggaaaaagacaacacg
cagactcctgggacacacacatcgcaccgccaacgcagacggaagcgcagcagcagcaga
tcggagaacgctggtggtccgtgttgggaaaagagccgaacgacaggtccggaatcggca
ccacaacatcctccaaaccagcgggggcagcaaaggaacaaccacaaacagaccccaaga
aactgcaatcagcacaaaccaaaccagcaacatcaacaccagaaaaaaaagtttcagtac
gggaactacaatcagtactacggttacaggaacccgggtgccatcgaggacgcacggatc
cgtgtttttgaaccggaatggttccagggtaaggaagtcctggatttaggctgtaacact
ggtcatgtgactcttaccattgcaaagaactggcgtccagcacgcatcgtgggtttggat
atcgacagcacactgatccacgcagcgaaacaaaacgtccggcattatctctcggaagtg
cacacgctccaggccaggaaagagaccgggagaggagaagatggagaggaaaaagacaaa
gagaaaccatctgtagatattagacaaaaaggcggatcagaggacggagagaacaagacg
gaacagattaaagattccatatcgtccaatgagaatcgcttatttcctgtttcgctctgt
gtctcccgaggaccgatcgctgctcctcctctaccggacacgcccacacttcctcctggg
aattttccttccaacgtcaccttcgtaagggcgaattacgtgttggacagtgacgtgttg
ttggagactcagcgtgaggaatttgacgtgatcatgtgtctgagtgtcactaagtggatc
cacctgaactggggtgacgtcggtctgcgtcgcttcttccagcgagtgtatcgtcacctt
cgcccaggcggcctcttcatcctcgaaccccaaccctggaactcctacaacaagagaaag
aagctcacggagacgatccataataactatttcagtatccagctgaagccggagcagttc
tcctccttcctgaccagcgaggtgggcttctccagctacgagctcctcggaactcccaac
acgtcgtcacgaggttttcagaggccgatttatctgtttcacaaaggaactgctctcgaa
agtgagtga
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