Silurus meridionalis (southern catfish): 124378862
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Entry
124378862 CDS
T08004
Symbol
acsl4b
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4b
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00061
Fatty acid biosynthesis
smeo00071
Fatty acid degradation
smeo01100
Metabolic pathways
smeo01212
Fatty acid metabolism
smeo03320
PPAR signaling pathway
smeo04146
Peroxisome
smeo04216
Ferroptosis
smeo04920
Adipocytokine signaling pathway
Module
smeo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124378862 (acsl4b)
00071 Fatty acid degradation
124378862 (acsl4b)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124378862 (acsl4b)
09143 Cell growth and death
04216 Ferroptosis
124378862 (acsl4b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124378862 (acsl4b)
03320 PPAR signaling pathway
124378862 (acsl4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smeo01004
]
124378862 (acsl4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124378862 (acsl4b)
Enzymes [BR:
smeo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124378862 (acsl4b)
Lipid biosynthesis proteins [BR:
smeo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124378862 (acsl4b)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of breast milk
124378862 (acsl4b)
Exosomal proteins of breast cancer cells
124378862 (acsl4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
124378862
NCBI-ProteinID:
XP_046694613
LinkDB
All DBs
Position
25:complement(17589908..17601348)
Genome browser
AA seq
670 aa
AA seq
DB search
MAKCVRAHSVSGHPEGPYRAVQCVDGLVQQELEGVDTLDKLFCYAVSRFTNSPCVGSREI
LSQDNETQPDGKVFQKLVLGEYKWKSYEEVDHHINFLGRGLSALGQRSRRSIAIFCETRE
EWMITAQACFRFNYPLVTLYATLGEDAVAFGLNQCEATHLITSKELLETKLKAVLPDVVG
LKHVIYVGSGSVSVENYPQSLSIHSLQDVMDFGAKPENLNVQSDSPSPADLAVVMYTSGS
TGRPKGVKMHHSNLIAGMAGQCQRIPGLGPEDVYVGYLPLAHVLELTAEISCLSHGCRIG
YSSPHTLSDQSSKIKRGSKGDCTVLKPTLIAAVPEIMDRIYKNVMSKVSEMSTLQRVLFN
MAYKYKVQQLEHGADTPICNTMVFKRISMLLGGRVRLMLSGGAPLSPDTHRFIKVCFCPV
SIGYGLTETCGAATISVFSDCTTGRVGAPLICSELKLRDWAEGGYTSQDKPHPRGEILIG
GPNVAMGYYGKETEGESGEFWVDEAGQRWFCTGDVGEVHPDGCLQIVDRKKDLVKLQAGE
YVSLAKVEAALKNCPLIDNICVFANSNQNYIISFVVPNQKQLTELANKNGIKGKWEELCN
HATLEQEVLKAIKGVATTNKLQRFEVPIKVRLSSQAWTPETGLVTDAFKLKRKELQTHYK
HDIERMYGAK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggctaagtgtgtgagagcacacagtgtgtcggggcatcctgaggggccgtaccgggcg
gtgcagtgtgtggacggtttggtacagcaggagttagagggcgtggacacgttggataaa
ctattctgttacgcagtgagcaggttcacaaactcaccctgtgtaggcagcagggaaatc
ctctcccaggataatgagacacaacctgatggcaaagtcttccagaagctggtcctgggt
gagtataagtggaagtcttacgaggaagttgatcaccacataaacttcctgggccgcggt
ctgtctgctttgggtcaaaggtcacgccgctcaatcgccatcttctgtgagacgagagag
gagtggatgatcacagcgcaggcctgcttcagattcaactacccattggtgacactctac
gctacacttggtgaagacgctgtagcctttggtttgaatcaatgtgaagccacacacctc
atcactagcaaggaactgctagaaaccaaactgaaggcagtgttgccagatgttgtgggt
ctgaagcatgtgatatacgtgggcagtgggagtgtgtctgtggaaaattacccacaatcc
ctcagcatccacagcttacaggacgtgatggatttcggagccaaacctgagaacttgaat
gtgcagtctgacagcccgtctccggctgatcttgcggtggtgatgtacactagcggatca
acaggtcgtcctaaaggagtgaagatgcaccacagtaacctcattgctggaatggctggc
cagtgccagagaattccgggtcttgggcctgaggacgtatatgttggttatcttccattg
gctcatgttctggagctgacagcagaaatatcctgtctgagtcacgggtgccggattgga
tactcctcaccacacacactctcagaccagtccagtaaaataaagcgaggcagtaaagga
gactgcactgtcctcaaacccactctcatcgctgctgttccagagattatggaccgtatc
tataagaatgtaatgagtaaggtatcagagatgagcacactacagagggtgctgtttaat
atggcctacaaatacaaagtacagcagctggaacacggagcagatacacccatatgtaac
acgatggtgtttaagcgtatatccatgttgttgggagggcgtgtgaggttgatgctcagt
ggtggagctcccctttctcctgacacacaccgtttcatcaaagtgtgtttctgccccgtc
agcattggttatggcctcacagagacctgtggggcagcaaccatctcagtgttttctgat
tgtaccacaggacgtgttggggcaccactaatttgctctgagctcaaactgcgagactgg
gctgagggaggatacaccagtcaggacaagccccatccccgaggtgagattctgattggt
gggccgaatgttgccatgggatactacggaaaggagactgagggagagagcggggaattc
tgggtagatgaggcagggcaacgctggttctgtacaggtgatgtaggggaggtgcatcct
gatggctgcttgcaaatagttgaccgtaagaaggacttggtgaagctgcaggcaggtgaa
tacgtttctctggcaaaggtggaggcggcactgaagaactgtccactaattgacaacatc
tgtgtctttgctaacagcaatcagaactacatcatcagctttgtggtgcccaatcagaag
caactgactgaacttgccaataagaatgggattaagggaaagtgggaggagctctgtaat
catgctaccctggaacaggaagtcctaaaagctattaaaggggttgctacaaccaataag
ctgcagaggtttgaggttcccataaaggtgcgtctcagctctcaggcctggactccggaa
acaggactcgttactgatgcatttaagctaaaaagaaaagaattacagacacactacaaa
catgacatcgagaggatgtatggagccaaataa
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