Silurus meridionalis (southern catfish): 124378864
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Entry
124378864 CDS
T08004
Symbol
cchcr1
Name
(RefSeq) coiled-coil alpha-helical rod protein 1 isoform X1
KO
K16760
coiled-coil alpha-helical rod protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124378864 (cchcr1)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
124378864 (cchcr1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HCR
bZIP_1
CENP-F_leu_zip
GBR2_CC
TolA_bind_tri
DUF6760
Motif
Other DBs
NCBI-GeneID:
124378864
NCBI-ProteinID:
XP_046694623
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Position
25:complement(17544455..17552745)
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AA seq
620 aa
AA seq
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MEKHTHTPGSGEELHSPADFITTHRSGVTCASSPLALLTPSHFTVTSTAPLTSTSVTPLC
PTPSLPPRGADPWTLFTHTREEGGQLHQKNQTLNHTHTPLREEMEKMRRKVERLTEDLRE
RDSIISRQCIEREELCAELKKSNSKMCEGHAAEIAALTHTSSELQNTILTLTQEVTSLRH
QVEEVTSERDVLQKQLSSEKAEQAETLHKLRSYIGTHAGGEEQHTLIERLQREKDGLCLS
VELLNVRVRSANDILTLQERELEEQCDPLHKDRSFRLLSLWREKVFTLLVQLRSKDSQLH
TENTQLHNMVSDLQKEVHKLRSHITFLEHNLQDKTAQLQLHNMHTQELQQQLCSVGEENE
RLKKDKESSEKSTNHITDSVHRLSVCAEEWESQVGAAQCRMSALTQRLNFANTRLHTVHG
LLMRREALQKVQQATKPTEPTSSDRCIESLQSQVALLSSERDTLTQELKRTPQLINNALR
DLQLQLNRSREELAVCELQCVEANAQCKEKERTIVELRNEAHHTQTILQEKLSEVESVCA
TQLRELESQLNTARREHTKAVVALCQVERTAVRERQQEREAESTLRTHTHKHHTTANTTE
GKRQRPQHSSGGGSAAGFDE
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacacacacacacaccaggtagcggagaggagctacactcacctgctgacttc
atcaccacacatcgctcaggtgtgacctgtgcctcctctcctctagccctcctcactcca
tctcacttcactgtgacctctactgcacccttgacctcaacctctgtgacccctctgtgc
cccaccccctcccttccaccccgaggggcagatccatggacccttttcacacacactcgg
gaggagggggggcagctccatcagaagaatcagacactgaaccacacacacactcctctg
agagaggagatggagaagatgaggaggaaggtggagagactgaccgaggacctccgagag
agagacagcatcatcagcaggcagtgtattgaacgagaggaattgtgtgctgaacttaag
aagagcaactcgaagatgtgtgagggtcatgcagcagagattgcagctttgactcacacc
agctcagaactgcagaacacaatcctcactctaacacaggaagtgacatcactcagacac
caggtggaggaagtgacatcagagagagacgtgctgcagaaacagctgagcagtgagaaa
gcagagcaggctgagactctgcacaagttacgcagctacatcggcacacacgcaggagga
gaggaacaacacacactcatagagaggctgcagagggagaaagacgggttgtgtttatct
gttgagctgctgaatgtccgagtcagatcagctaatgacatcctgactctacaggagaga
gaactagaagagcagtgtgatcctctccataaagacaggtcatttcggttgttgagttta
tggagagagaaggtctttacactgcttgtacaactacgctcaaaagactcccaactacac
actgagaacacacaactacacaacatggtttctgatctgcagaaggaggttcataaacta
aggtcacacatcacctttctagaacacaaccttcaggacaaaactgcacaactacagcta
cacaacatgcacacacaggagctccagcaacagttgtgtagtgtaggtgaagagaatgag
agactaaaaaaagacaaagagagcagtgagaaatctactaaccacattactgattctgta
cacaggttgagtgtgtgtgctgaggagtgggagagtcaggttggagctgctcagtgtcgt
atgagtgctctaacacagagactcaactttgcaaacacacgtcttcacacagtgcatggt
ttgctgatgaggagagaagctctgcagaaagtacaacaggccacaaaacctacagaacct
acatcctcagaccgctgcattgagagtctgcagtcacaggtggcgctgctgagctcagag
agagacacactcacccaggaactgaaacgaacaccacaactgatcaataacgcactgaga
gacctacaactacaattgaacaggagcagggaggagttggcagtgtgtgagttgcagtgt
gtggaggctaatgcacaatgtaaggaaaaggaaaggaccatcgtggagctgcgcaatgag
gcccatcacacacagaccattctacaggagaaactctctgaggtagagagtgtgtgtgcc
acacagctcagagagctggagagtcaactaaatacagcaaggagagaacacactaaagca
gttgtagccttgtgccaggtggaacgtacagcagtgagagagagacagcaggagagagag
gcagagagcacgctcagaacacacacacacaaacatcacacaactgcaaacacaactgaa
ggaaaaagacagagaccacaacattcttctggcggtggttcagcagcagggtttgatgaa
tga
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