Silurus meridionalis (southern catfish): 124378882
Help
Entry
124378882 CDS
T08004
Symbol
hnrpkl
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K, like
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124378882 (hnrpkl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124378882 (hnrpkl)
Spliceosome [BR:
smeo03041
]
Common components
Common spliceosomal components
hnRNP proteins
124378882 (hnrpkl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
MOEP19
KH_Vigilin
DJ-1_PfpI
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
124378882
NCBI-ProteinID:
XP_046694646
LinkDB
All DBs
Position
25:4007258..4019786
Genome browser
AA seq
430 aa
AA seq
DB search
METEIEQQDEETTFSNTDTNGKRPAEDMDEEQAFKRSRNTDEMVELRVLLQSKNAGAVIG
KGGKNIKALRTDYNASVSVPDSSGPERILSVSADIETIGEILLKIIPTLEEYQHYNGIDF
DCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPQRVV
ECIKVILELTSEAPIKGRAQPYDPNFYDETYDYGGFTMMFEERGRRPMGGFPMRGRGAFD
RMPPSRGGRPMLPSRHDYDDMSPRRGPPPPPLGRGGRGGSRARNLPLPPPPPPRGGGDRF
SHHHSNIDDRPSDRRGRPGDRYESMGGGGYDNNSSWEPFQSGGRSSYGDIGGPVITTQVT
IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQN
SVKQYSGRFF
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaaattgaacagcaggacgaagagaccacattcagtaacactgacactaac
ggtaaacgccctgctgaggacatggatgaggaacaagccttcaaacgatctcgtaacaca
gatgagatggtggagctgagagtgctgctacagagcaaaaatgctggtgcagtgatcgga
aaaggtggcaagaacattaaagcgctccggacagactacaatgccagtgtatcagtccca
gacagcagtggcccagagcgcatcttgagcgtgagtgcagatatcgagacaattggagag
attcttctgaagatcatccctactctggaggagtaccagcactacaatggtatagatttt
gattgcgagctgcgccttctgattcatcaaagtttagcaggaggcattattggtgtcaaa
ggggccaaaattaaggagctcagagagaatacccagacgaccattaaactcttccaagaa
tgctgcccgcattcgacagaccgtgtggttttagtgggaggaaaacctcagcgagtggtg
gagtgcattaaggtcatcctagaactgacgtcagaggctcctatcaaaggccgcgctcag
ccctacgacccgaatttctacgatgagacttacgactatggcggcttcaccatgatgttc
gaagagagaggacgacggcccatgggtggttttcctatgcgcgggcgtggcgctttcgat
cggatgccccccagccgtggcgggcgccctatgctcccctctaggcacgactatgatgat
atgagtcctcgtcgtggaccgcctccacctccgttggggagggggggtcgaggagggagc
cgggctcgaaatctgcccctccctcctccacctcctcccagaggaggaggcgaccggttt
tctcatcatcacagcaatatagacgacagaccgagtgacaggagaggaagacccggagac
cgctacgaaagcatgggtggaggtggatatgacaataactcttcttgggaacccttccaa
tccggcggacgaagttcctacggtgacatcggcggtcccgtcatcacaacacaagtcacc
atacccaaagatctggctggttccatcatcgggaaaggtgggcagcgtattaaacagatc
cgtcacgagtctggagcctccattaaaatcgatgagcctctggagggttcggaggatcgt
atcatcaccatcacaggaactcaggaccagattcagaacgcccagtatcttctgcagaac
agtgtgaagcagtactccggtcggttcttctag
DBGET
integrated database retrieval system
